KEGG   Plasmodium malariae: PMUG01_08047600
Entry
PMUG01_08047600   CDS       T09444                                 
Symbol
PRPF19
Name
(RefSeq) pre-mRNA-processing factor 19, putative
  KO
K10599  pre-mRNA-processing factor 19 [EC:2.3.2.27]
Organism
pmal  Plasmodium malariae
Pathway
pmal03040  Spliceosome
pmal04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:pmal00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    PMUG01_08047600 (PRPF19)
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    PMUG01_08047600 (PRPF19)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pmal03041]
    PMUG01_08047600 (PRPF19)
   04121 Ubiquitin system [BR:pmal04121]
    PMUG01_08047600 (PRPF19)
   03400 DNA repair and recombination proteins [BR:pmal03400]
    PMUG01_08047600 (PRPF19)
Enzymes [BR:pmal01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     PMUG01_08047600 (PRPF19)
Spliceosome [BR:pmal03041]
 Complex B
  Other components
   Prp19 complex
    PMUG01_08047600 (PRPF19)
 Complex C
   Prp19-CDC5 complex
    PMUG01_08047600 (PRPF19)
Ubiquitin system [BR:pmal04121]
 Ubiquitin ligases (E3)
  U-box type E3
   PMUG01_08047600 (PRPF19)
DNA repair and recombination proteins [BR:pmal03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    PMUG01_08047600 (PRPF19)
SSDB
Motif
Pfam: WD40_Prp19 Beta-prop_THOC3 Beta-prop_WDR3_1st Beta-prop_WDR5 WD40 WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_WDR36-Utp21_2nd WD40_CDC20-Fz Prp19 Beta-prop_WDR3_2nd Beta-prop_CAF1B_HIR1 WDR55 Beta-prop_TEP1_2nd EIF3I WD40_MABP1-WDR62_2nd WD40_Gbeta Beta-prop_WDR75_1st Beta-prop_WDR36-Utp21_1st NBCH_WD40 Beta-prop_WDR90_POC16_2nd ANAPC4_WD40 Beta-prop_EML Beta-prop_WDR19_1st Beta-prop_IFT122_1st WD40_MABP1-WDR62_1st Beta-prop_TEP1_C Beta-prop_Vps41 Beta-prop_EIPR1 Beta-prop_WDR41 Beta-prop_IFT140_1st Beta-prop_Aladin Beta-prop_DCAF12 DUF7165 WD40_RFWD3 TBCA WDR90_beta-prop_4th Beta-prop_SPT8 Tricorn_2nd Beta-prop_DCAF4 HAP1_N zf-Nse U-box Snf7 BORCS8 zf-NOSIP Tup_N NYD-SP28_assoc
Other DBs
NCBI-GeneID: 39868458
NCBI-ProteinID: XP_028861319
UniProt: A0A1C3KYQ4
LinkDB
Position
8:complement(<1864897..>1866393)
AA seq 498 aa
MSILCTISGQTPEEPVVSKTGYIFEKRLIEKHIINYGICPVSGEILTLQDLYPLKNEKIV
KPRPISASSIPGLLSMFQTEWDSIISEMFSLRTHVNDIRNQLSHSLYQYDAATRVIAKLL
KEKDSYKEEITNLRNQIFQLKSGNDINEFEIGITDELLNEMQNIAKDLLMNRKKRKIENV
CSVDKWKEFTNTNEFDIHSSVVPGVTSLALDINKYKYNYNHDHINHNFFSGGKDGNIYYV
SLSDNKIISKLQGHLKKVNALISHPSNFVCISGSNDKTVRIWKGDSDTNEYVTAHVITKH
KDHITSLSLHPLENLFISASKDNVWILHDLETAKTIKTCKNNPSPFKNLSIHPDGMMLGI
ASEDSNIHIYDIKSQEYKASLTGHTKAVDCISFSENGYYLASCSKDNTIKLWDLRKALSF
QTLELEQTPNFITFDYSGKYLSVALGNDIHIYNFHTKNQVTLVNTLSSHTDTVTKTCFGS
RTSYLLSSSMDKTVKLWS
NT seq 1497 nt   +upstreamnt  +downstreamnt
atgtcgattctgtgcacgattagcggacagacgcccgaagagccagttgtgagcaaaaca
ggctatatttttgaaaaacgactaatagagaaacatataataaactatgggatatgtcca
gtaagtggggaaatattaactttacaggatttgtatcctttaaaaaatgaaaaaattgtt
aaacctagacctataagtgctagtagtattcctggacttttgtccatgtttcaaaccgaa
tgggactccataatatcggagatgtttagcttaagaacgcatgtaaatgatattagaaat
caactaagtcatagtctttatcaatatgatgcagctacaagagtaattgcaaaattatta
aaagaaaaagatagttataaagaagagattactaatttaaggaatcaaatttttcaatta
aaaagtggaaatgatataaatgaatttgagattggaataacggatgaactactaaacgag
atgcaaaatattgcaaaagatttattaatgaatagaaagaaaagaaaaattgaaaatgta
tgttctgtagataagtggaaagaatttacaaatacaaatgagtttgatattcattcttca
gttgtacctggagttacttccttagcattagatataaataaatataaatataattataac
catgatcatattaatcataatttcttctcaggaggtaaagatggaaatatatattatgtt
tctctatctgataataaaattatttcaaaattacaaggacatttaaaaaaagttaatgca
ctaatatctcatccgtctaattttgtttgtatatctggatcaaatgataaaacggttcga
atatggaaaggtgattcggataccaatgaatatgtaactgctcatgtaattacaaaacat
aaagatcatataacatcattatctttacatccactagaaaatctatttataagtgcttct
aaagataatgtatggattttacatgatttagaaacagctaaaacgataaaaacttgtaaa
aataatccttctccttttaaaaatttatctattcatcctgatggtatgatgctaggaatt
gcatcggaagattcaaatatacatatatatgatattaaaagtcaagaatataaagcttca
cttacaggacatacaaaagcagtagactgtatctcctttagcgaaaatggttattactta
gcatcttgttctaaagataatacaattaaattgtgggatctccgaaaagctcttagtttt
caaacattagaattagaacaaacaccaaattttatcacttttgattattctggaaaatat
ttatcagttgccctgggaaatgacatacatatatataactttcatacaaagaaccaagtt
acgctagttaacactctttcgtcgcatactgatactgttaccaaaacttgctttggcagc
agaacttcctatttgttgtctagttctatggacaagacagtgaagttatggagttag

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