Plasmodium malariae: PMUG01_10024300
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Entry
PMUG01_10024300 CDS
T09444
Symbol
LSM2
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm2, putative
KO
K12621
U6 snRNA-associated Sm-like protein LSm2
Organism
pmal
Plasmodium malariae
Pathway
pmal03018
RNA degradation
pmal03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pmal00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PMUG01_10024300 (LSM2)
09123 Folding, sorting and degradation
03018 RNA degradation
PMUG01_10024300 (LSM2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmal03019
]
PMUG01_10024300 (LSM2)
03041 Spliceosome [BR:
pmal03041
]
PMUG01_10024300 (LSM2)
Messenger RNA biogenesis [BR:
pmal03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
PMUG01_10024300 (LSM2)
mRNA degradation factors
5'-3' decay
Lsm complex
PMUG01_10024300 (LSM2)
Spliceosome [BR:
pmal03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
PMUG01_10024300 (LSM2)
Complex C
U2 snRNP components
PMUG01_10024300 (LSM2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
Hfq
Motif
Other DBs
NCBI-GeneID:
39869243
NCBI-ProteinID:
XP_028862018
UniProt:
A0A1C3KDJ9
LinkDB
All DBs
Position
10:complement(658711..659687)
Genome browser
AA seq
103 aa
AA seq
DB search
MLFFTFFQQLAEKNHHVTVELKNDLQISGVLHSVDQYLNIKLTNVSVNNPEKYPHLLSIK
SCFVRGSVVRYVFLQSNEINIDKLHHMCRQEAKITSEKEKERR
NT seq
312 nt
NT seq
+upstream
nt +downstream
nt
atgcttttttttacattttttcaacagttagctgagaaaaatcatcacgtaacagtagaa
ttaaaaaatgatttacaaatatcgggtgtgttacattcagtagatcaatacttaaacatt
aagttaacaaatgtgtctgtcaacaatccggagaaataccctcacttgctatcgattaaa
tcttgttttgtgcgaggatcagtagtaaggtacgtttttttgcagtcaaatgaaattaac
attgacaagctacatcatatgtgcagacaagaagcaaaaataacatcagagaaggagaaa
gaaaggagataa
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