Plasmodium malariae: PMUG01_11026700
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Entry
PMUG01_11026700 CDS
T09444
Name
(RefSeq) exosome complex exonuclease RRP44, putative
KO
K12585
exosome complex exonuclease DIS3/RRP44 [EC:3.1.13.-]
Organism
pmal
Plasmodium malariae
Pathway
pmal03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pmal00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PMUG01_11026700
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmal03019
]
PMUG01_11026700
Messenger RNA biogenesis [BR:
pmal03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
PMUG01_11026700
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNB
OB_Dis3
CSD2
Rrp44_S1
OB_HELZ2
PIN_4
LSM
CDC45
OB_RNB
Motif
Other DBs
NCBI-GeneID:
39869727
NCBI-ProteinID:
XP_028862456
UniProt:
A0A1D3SMH6
LinkDB
All DBs
Position
11:complement(<880837..>883899)
Genome browser
AA seq
1020 aa
AA seq
DB search
MHTFRFLNRKNDQRVQKCSYKCSANYRITKIIREIYLRNDISCGIEKCKVCENKKKKFLD
GERNILILDMDSIIKYMDFLYECNIDNILIPLTIYEHVRTFNKILYKKLHELCYEVEENI
PNSSKRYSVFVNKFCKFTYVDDNVQESTKQIQEIIKIVIWLRHHNPKLHIIVISNNLFLK
EDCEKNDISCFTLFKYVKELKKKSNKKEGSPINIDKLKIYFEDDMTNENNKHDSMVREQE
GSHILVDNDKYYDKKQTFEPHLSKKDIIQKLRDNEIVKGVFQIICVNKMALVKVSENEEI
VIRGARKMNRAIHNDIVVVEILQERGEVSDVEDDYFEELISPEDSEEEEQKEKVKEEEKE
DTREQENTPKKQSIVQSKRKNYQFKENNEERNHPGKNEEDSKDDGIKQIRLNESKKKLYG
KVVGIISRCRREYGGVIKAYDNNRNMHIKKMLFFKAFNSKIPYIIIKSNLEEELRNKRVI
VIIDNWDYNSKYPLGRCLSVLGTCDDIETETKLIYNEYNISTKEFSESAYMCLPPNNWKI
PEEEYKKRKDFRDVLTFSIDPLGCQDIDDALSVEVIDEMKIIRVGVHIADVSYFVKQNSP
LDLEASKRCTTVYLINQRVEMLPKLLTTDLCSLVENEDRLTYSCIFTFDTNYDIRDITVS
KCIINSNKSFSYEQAQNIIDDVNNTTPTAQALRILNAIAKSLKKKWSEEGALELRGNSEV
LFEFESNDFSKAKNLKPYVSYETNKLIEAFMLLANRSVARIIFQSFKAASVLRRHPPPKN
ENLKELNDYLQSINVYDFKYSTSKELSHSLNNINLKNDQILTNILKVLVTKCMNEAVFIS
GYNVHNNQMLKHYGLAADIYTFFTSPIRRYADIMVHRILNHIYGIEKLDNKYIDIIYLNK
QISLLNEKYRNARFASRASVDFFSYLYIKKIGNQITNAVIINLKKNGIQIYVPGYSIEGI
CYLKRKDGFIYDEKRKRFNKIDENQRELFHLKFYDNIQVHMQVDSYEIKCQNHFIFIKKL
NT seq
3063 nt
NT seq
+upstream
nt +downstream
nt
atgcatacgttcaggttcctaaacagaaagaacgatcagcgtgttcagaaatgttcgtac
aaatgcagcgcgaattatagaattacaaaaataataagagaaatatatttaagaaatgat
ataagctgcgggatagaaaaatgtaaagtttgtgaaaataaaaagaagaaatttttagat
ggagaaagaaatattcttattttagatatggatagtataattaaatatatggatttttta
tatgaatgtaatattgataatatattaattccattgacaatttatgaacatgtcagaaca
ttcaataaaatattatataaaaaattacatgaactatgttatgaggtagaggaaaatata
ccaaatagtagtaaaagatattctgttttcgtgaataaattttgtaaatttacctatgtt
gatgataatgttcaggagagtacaaaacaaatacaggaaattataaagatagtaatatgg
ctaagacaccacaatccaaaactacacataatagttataagtaataatttgtttttaaaa
gaagattgtgagaaaaatgatatatcttgttttactttatttaaatatgtaaaagaatta
aagaaaaaaagtaataaaaaagaggggtctccaattaatatagacaagttaaaaatatat
tttgaagatgatatgactaatgaaaataataaacacgattcgatggtaagagaacaggaa
ggtagtcatatacttgtagataatgacaaatattatgataaaaaacaaacattcgaacca
catttaagtaaaaaggatataattcaaaagcttcgagataatgaaatagttaaaggagtt
tttcaaattatatgtgttaataaaatggcattagtaaaagtttctgaaaatgaagaaatt
gtgataagaggagctagaaaaatgaacagagcaatacacaacgatattgtggttgttgaa
attttgcaagaaagaggggaagtgtcggatgtagaagatgattattttgaggagttgatc
agtccagaggattctgaggaggaagaacagaaggaaaaagtaaaagaggaagaaaaggag
gatacgcgagagcaagaaaatacgcctaaaaagcaatccatcgtacagtcaaaaagaaaa
aactatcaattcaaagagaacaatgaagaaaggaatcatcctggaaaaaatgaagaagat
tcgaaggatgatggtataaaacaaatacgtttaaatgaaagtaaaaaaaaattatacgga
aaagtagttggtattattagtagatgcagaagagaatatggtggtgtaattaaggcgtat
gataataatagaaatatgcacataaaaaaaatgttattttttaaagctttcaatagcaaa
ataccatatattataataaaaagcaatttagaagaagaactacgaaataaaagagtaata
gttattatagataattgggattataactcaaaataccctctaggaagatgtttaagtgtg
ctaggtacttgtgatgatattgaaactgagactaaattaatttataatgaatataatatt
tcaacgaaagaatttagtgaaagtgcttatatgtgtttacctccgaataattggaaaata
cctgaagaagaatataaaaaaagaaaagactttagagatgttctaacctttagcattgat
cctctaggttgtcaagatattgatgatgcattatcagttgaggtaatagatgaaatgaaa
attataagagttggtgttcatatagcggatgtgtcttattttgttaaacagaatagtcct
ctggatttagaagcttcaaaaagatgtactactgtttatttaataaatcaaagagttgaa
atgcttcccaaattgttaacaacagatttatgttcactggttgaaaatgaagatagacta
acttatagttgtatttttacattcgatactaattatgatatacgtgatattactgtttcc
aagtgtattattaatagtaataaatccttttcatatgagcaagctcaaaatattatcgat
gatgtaaataatactactcctacagcgcaagcattaagaatactaaatgcaattgcgaaa
agcttaaagaaaaaatggtcagaggagggtgcccttgaattaagaggaaattcagaagtg
ttattcgaatttgaatcaaacgatttttctaaagccaaaaatttaaaaccatatgttagt
tatgaaacaaataagttgatagaggcatttatgttactagcaaataggtcagtggcaaga
ataatttttcaaagttttaaagcggctagtgttttgagaaggcacccacctccaaaaaat
gaaaatttaaaagagctaaatgattatttacaatcaattaatgtatacgattttaagtat
agcacttcaaaggaattatctcattcacttaataatataaatttaaaaaacgatcaaatc
ttaacaaatattttaaaagttttagttacgaaatgtatgaatgaagcagtttttatatca
gggtataatgtacataataaccaaatgttaaaacattatggtttagcagcagatatttat
accttcttcacttcaccaattagaagatatgcagatataatggtgcacagaatattaaat
catatatatggtatcgagaaattagataacaaatatatagacatcatttatttaaacaaa
caaattagcttattaaatgaaaaatatagaaatgcaagatttgcctcaagggcatccgtt
gattttttttcttatctttatataaaaaaaataggaaatcaaataactaacgctgttatt
atcaatctgaaaaaaaatggtatacaaatatatgtacctggatattctatagaaggtatc
tgttacttaaaaagaaaggatggatttatatatgacgagaaaagaaaaagattcaacaaa
attgacgaaaaccaaagagaacttttccaccttaaattttatgacaacatacaggttcac
atgcaggtcgacagttacgaaattaaatgtcaaaatcattttatttttattaaaaagctg
taa
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