Plasmodium malariae: PMUG01_11043100
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Entry
PMUG01_11043100 CDS
T09444
Name
(RefSeq) cleavage stimulation factor subunit 1, putative
KO
K14406
cleavage stimulation factor subunit 1
Organism
pmal
Plasmodium malariae
Pathway
pmal03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pmal00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
PMUG01_11043100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmal03019
]
PMUG01_11043100
Messenger RNA biogenesis [BR:
pmal03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
PMUG01_11043100
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
Beta-prop_THOC3
Beta-prop_WDR5
WD40
Beta-prop_WDR3_1st
WD40_WDHD1_1st
Beta-prop_IFT122_1st
WDR55
WD40_CDC20-Fz
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR3_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_1st
WD40_Gbeta
ANAPC4_WD40
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_DCAF4
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_SCAP
Beta-prop_Aladin
2CompART
LisH_PAC1
Motif
Other DBs
NCBI-GeneID:
39869893
NCBI-ProteinID:
XP_028862616
UniProt:
A0A1A8WV58
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Position
11:complement(<1650816..>1652690)
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AA seq
624 aa
AA seq
DB search
MKEFNDNTSFLPNVVSNENVNNGSSISNDENIAHNENVDENENVDENENVDENENVDENE
NIDDNENVRHSENLGYDENVDDNENVDDNENVDDNENVGHSENVYHRESLYQGKSLYHGE
SLYHSENIYKNELIDDNDIAPISDCVTSNYNDVTVVSDEEEAKEKKEEYNKSFSTVKMER
PIWNIDKIAFYEIVLKQLKDDNLTESFDILKRELNLEENKTAEENYLFNLFTKNIFKKPE
INNEEEYRKKLTSYEILNKKLNISNNNCCILNYDVKNGKVRKVYSYEVTDRIELIHKNKC
ICCATNFTNNILCSGGSDNIIKIAKINDIKKKKIFTIDNKHTGKINCLKFHPMKNILFSA
SDDCTIQIMDVNKILKKKKQQYNKYNKNIREKLHDDLFRNIIIQDKNPFISMCVHPCGDF
LYASNKNENILKLYDLETLTCFTSSDQNTYHTSSINDISATSDGNIYASVSVDGNIKIWD
GHNSHLIHTQLNAHNGYSIQSVKFNKSNCYIITSGLDGQTKIWDIRNFKSLFTFGHGLSC
SSNKSIFMNDELLLANIIQTNDHFTSKFYIYNSYFGNIEHNIQDIHIDQISDIVNAKDGL
NVHTAGYDCVCKTIKIEQKYVHDY
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaatttaacgacaatacttcttttttgccaaatgttgtaagtaatgaaaatgtc
aataatggtagtagtatatcgaacgatgaaaatatcgcgcataatgaaaacgtagatgaa
aatgaaaacgtagatgaaaatgaaaacgtagatgaaaatgaaaacgtagatgaaaatgaa
aacatagatgataatgaaaacgtacgtcatagtgaaaatttaggttatgatgaaaacgta
gatgataatgaaaacgtagatgataatgaaaacgtagatgataatgaaaacgtaggtcat
agcgaaaacgtatatcatcgtgaaagcctgtatcaaggtaaaagcctatatcatggggaa
agcctatatcatagtgaaaacatatataaaaatgaattaatagatgataatgacattgca
ccaatcagcgactgtgtaacaagtaattataatgacgtaactgttgtgtcagatgaagaa
gaggctaaagaaaaaaaagaggagtacaacaaatcgtttagcactgtaaagatggaaaga
cccatttggaacattgataaaattgcattttatgaaattgttttgaaacaacttaaagat
gacaatttaactgaatcgttcgatattttaaaaagggagttaaatttagaagaaaataag
actgctgaagaaaattatctattcaatttatttacaaagaatatatttaaaaaacctgaa
ataaacaatgaagaggaatatagaaaaaaattgacgtcatacgaaatcttaaataaaaaa
ttaaacatatccaacaacaattgttgcattctaaattacgatgtaaaaaacggaaaagtg
agaaaagtatattcttatgaagttacggatcgtattgaattaattcataaaaataaatgt
atttgttgtgcaacaaattttacaaataatattttgtgttcaggtggttcagataatatt
ataaaaatagctaaaataaatgatataaaaaaaaaaaaaatttttactattgataataaa
catacaggaaaaattaattgccttaaatttcatcctatgaaaaatattttattttcagca
agcgatgattgtacaattcagattatggatgtaaataaaattttaaaaaagaaaaagcaa
caatataataaatataataaaaatatacgtgaaaaattacatgatgacctgttcagaaat
attataattcaagataaaaatccttttatatccatgtgtgtacatccgtgtggtgatttc
ctttatgcaagtaataaaaatgaaaatatattaaaattatatgaccttgaaactttaaca
tgttttacgtcatctgatcaaaacacatatcatacttcatccattaatgatattagtgca
acatccgatggaaatatatatgcttccgtttccgttgatgggaatataaaaatttgggat
ggtcataattctcatttaatacatacacagttaaatgcacataatgggtactctattcaa
tcagtcaaatttaacaagtcaaattgttatatcataacatcaggacttgatggacaaaca
aaaatttgggatataagaaattttaaatccctttttacctttggacatgggttatcatgt
tcttcaaataaaagtatctttatgaatgatgaattgctcttagctaatattattcaaaca
aatgatcattttacatcgaaattttatatttacaattcctattttggaaatatagagcat
aacatacaagatatacacatagatcagatatctgatattgttaatgcaaaagatgggttg
aatgtgcacacagctgggtatgattgtgtgtgcaagaccattaaaattgagcagaaatac
gtgcacgattattag
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