KEGG   Plasmodium malariae: PMUG01_12021000
Entry
PMUG01_12021000   CDS       T09444                                 
Symbol
PRPF4
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein PRP4, putative
  KO
K12662  U4/U6 small nuclear ribonucleoprotein PRP4
Organism
pmal  Plasmodium malariae
Pathway
pmal03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pmal00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    PMUG01_12021000 (PRPF4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pmal03041]
    PMUG01_12021000 (PRPF4)
Spliceosome [BR:pmal03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6 snRNP specific factors
    PMUG01_12021000 (PRPF4)
SSDB
Motif
Pfam: WD40_Prp19 WD40 WD40_WDHD1_1st WD40_CDC20-Fz WDR55 Beta-prop_EML_2 EIF3I Beta-prop_EIPR1 Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_RIG_2nd Beta-prop_EML Beta-prop_WDR90_POC16_2nd WD40_RFWD3 ANAPC4_WD40 PRP4 Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_IFT140_1st Beta-prop_WDR19_1st RMC1_N NBCH_WD40 WD_LRWD1 Beta-prop_SCAP
Other DBs
NCBI-GeneID: 39870204
NCBI-ProteinID: XP_028862904
UniProt: A0A1A8WTI6
LinkDB
Position
12:complement(544786..546702)
AA seq 638 aa
MKISDVLSDSKLHESLKLRKSELNSSQISKDNILEEFDIKNKIRKVSLGIPTKDIDVKNV
LRLLKEPICLFGEDSYDKRKRLKTVLVTKYDKLIIKKNNENEEEVEEFKNILKKYYIDFS
SLCDVDSPEYIKIKQLEDELVKKRLKEQSIEGKGIDSRDKLKEKFYTESSEELKFSRLDI
TLKTLPRIFLYKEMINNFQNKYQKEDYENYIISYNEHMKNEFDLYISQLGDDRPLTMGKF
SPDNSVFAVSSYNTYINIFNYKNDNYNIVKTLKKGHDDKINCIEWNYPNNYSYYNTLNYT
DIRKKDLLLASCSSDKTFCIWRPFPGEDINDYNITHKSYFEGNKKRIRKNNTEIDDTDER
KGDHTKIFEKNGHEVKTNCGELKKQASKQNGNKDEYNIEDENEQEVDDKNAKGNKYLLCK
VKAHEDRINKICFHPLNKYVLTCSEDETIKFFDIETQKELFYQEGHNAIVYTATFNPYGN
LYLSGDSKGGLMLWDIRTGRNIDKKQAVHNNCIMNINFNPFMPNMFCTCSSDNTIKIFDL
RNFKISCNILAHNKIVTDAIFEPTYGRYITSCSFDTFIKIWDSVNFYCTKILYNNENKVR
NVDISPDGKFISSTSFDRTWKLYKNTEFVQDNILSHLF
NT seq 1917 nt   +upstreamnt  +downstreamnt
atgaaaatcagcgatgtccttagtgattcaaaattacatgaaagcctaaaattaagaaag
agtgagttgaacagcagtcaaattagtaaggacaatatattggaagaatttgatataaaa
aataagataagaaaagttagcttaggtattccaacaaaagatatagatgtaaaaaatgtt
ttaaggttattaaaggaacctatttgtttatttggtgaggacagttatgataagaggaaa
agattaaaaactgttttagtcacaaaatatgataaactgataataaaaaaaaataatgaa
aatgaagaagaagttgaagaattcaagaatatcttaaaaaaatattatattgattttagt
agtttatgtgatgtagattctcctgaatatataaaaataaaacaactagaagatgaatta
gtaaaaaaaagattaaaagaacaaagtatagaaggaaagggaattgattctagggataaa
ttaaaggagaagttttatacagaaagttcagaagagctcaaattctcacgtctagatata
acgctaaaaacattacctagaatatttttatacaaagaaatgataaataattttcaaaac
aaatatcaaaaagaagattatgaaaattatattatttcttataatgaacatatgaaaaat
gaattcgatttatatatttcacagttaggtgatgacagaccattaaccatgggaaaattt
tcccctgataacagcgtttttgcagtaagtagttataacacatatattaatatatttaat
tacaaaaatgataattataatattgtaaaaactcttaaaaaaggtcatgatgataagata
aactgcatagagtggaactaccccaataattattcttactataatacattaaattataca
gatataaggaaaaaagatttattgctagcttcctgctcatcagataaaaccttttgtata
tggaggccttttccaggtgaagacataaacgattataatattacacataaaagctatttt
gaaggaaataaaaaaagaattagaaaaaataacactgaaatagatgatacagatgaaagg
aaaggagatcacaccaaaatttttgaaaaaaatggtcatgaagtgaagacgaattgtgga
gagcttaagaagcaggctagtaaacagaatgggaataaggatgaatataatatagaagat
gaaaatgaacaggaggtggatgacaaaaatgccaaaggcaacaaatatttgctatgtaaa
gtaaaagctcatgaagacagaataaataagatatgttttcatcctttgaacaaatatgta
ttaacatgttcagaagatgaaacaataaaattttttgatatagaaactcaaaaggaatta
ttttatcaagaagggcacaatgctatagtatatactgctacatttaatccttatggaaat
ttatatttatcaggagattcaaaaggcggattaatgttatgggatattagaacaggaaga
aatatagataaaaaacaagcagttcataataactgtattatgaatattaattttaatcca
tttatgccaaatatgttttgtacgtgttcttcggataacactattaaaatatttgacttg
agaaattttaaaatttcttgtaatatactagcgcacaacaaaattgtcacagatgcaatt
tttgaaccaacatatggtagatacataacatcatgttcttttgacacttttattaaaata
tgggactctgtaaatttttattgcactaaaattttatataataatgaaaataaagtaaga
aatgttgacatatcccctgatggtaaatttatatcctccacttcttttgacagaacatgg
aaattgtacaaaaacacagaatttgttcaggacaatattctttctcatttattttga

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