Plasmodium malariae: PMUG01_12035200
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Entry
PMUG01_12035200 CDS
T09444
Name
(RefSeq) chromatin assembly factor 1 subunit, putative
KO
K10752
histone-binding protein RBBP4
Organism
pmal
Plasmodium malariae
Pathway
pmal03082
ATP-dependent chromatin remodeling
pmal03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
pmal00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
PMUG01_12035200
03083 Polycomb repressive complex
PMUG01_12035200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pmal03036
]
PMUG01_12035200
Chromosome and associated proteins [BR:
pmal03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
PMUG01_12035200
Histone modification proteins
HAT complexes
HATB complex
PMUG01_12035200
HDAC complexes
Sin3A-HDAC complex
PMUG01_12035200
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
PMUG01_12035200
PRC2.2
PMUG01_12035200
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
PMUG01_12035200
Heterochromatin formation proteins
Other heterochromatin formation proteins
PMUG01_12035200
Chromatin remodeling factors
NuRD complex
PMUG01_12035200
NuRF complex
PMUG01_12035200
NuRF complex (fruit fly)
PMUG01_12035200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAF1C_H4-bd
WD40_CDC20-Fz
WD40
WD40_Prp19
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_TEP1_2nd
Beta-prop_EIPR1
WD40_WDHD1_1st
EIF3I
Beta-prop_EML_2
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_SCAP
Beta-prop_Vps41
Beta-prop_NOL10_N
Motif
Other DBs
NCBI-GeneID:
39870342
NCBI-ProteinID:
XP_028863034
UniProt:
A0A1A8WA17
LinkDB
All DBs
Position
12:1150775..1152304
Genome browser
AA seq
509 aa
AA seq
DB search
MIDIISEKNKSYDLMDSYESKSPIENETNENAKVDIINERYIIWRKNTPFLYSSLLKNKL
DWPSLTVEFLGSENSFKSKTNYFTNKILLGTHTSNQDSEYVYIGEIKFPLYSTKEDVLQY
ENYTGFISNKKKRKGHPLPSFEIKAKLLHPGEVIRATHLPNNSFFIVTQTYNGNILLFDY
TKHPSFPSDISTCYPQMILKGHTSEGSGLCWNINKIYNNCSNKNTNVFNDENENDGTEGT
DDPSMDVNTSNLLLASCASDGSICLWDINKGTKSNEVPRTYGINKIGKTADYNIKIYENT
PTLSPLCTWTNKNKETSLNDVFFHPKFNNALGVCDDEGYMSLYDIRKKYFFSKPEINFKD
HNEPMNTFSFDNFSDYIFSCGYTDGLISIWDMRFNKESLLKIDYHTQSINRIKFCLMQSG
VFGSCSDDGIACIWDISRNSVNYEQVRKLDDDIYNNPKKIPKQLLFVHGGHVGSVYDMSW
ANSNTFLVATVGVDNSLQVWHMNEQFIFQ
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgatagacataataagcgaaaaaaacaaaagctatgatttgatggactcttatgaatct
aaaagtccaatagagaatgaaacaaatgaaaatgcaaaggtagatattattaatgaaaga
tatataatatggaggaaaaacactccatttttatatagttcacttttaaaaaacaaatta
gattggccatcgttaacagttgaatttttaggaagcgagaattcttttaagtcaaaaacc
aattattttacaaataaaatacttttaggtacacacacgtctaatcaagattctgaatat
gtatacataggtgaaattaaatttccattatattctacaaaggaagatgtactacaatat
gagaattatacaggttttataagtaataaaaagaaaagaaaaggtcatccattaccatct
tttgaaataaaagcaaaactgttacatccaggtgaagtgataagagctacccatttaccc
aataattcgttttttatagttacacaaacatataatggaaatatattattatttgattat
acaaaacatccttcatttccttctgatatatctacatgttacccccagatgatattaaaa
ggacatacaagtgaaggaagtggcttatgctggaatattaataaaatatataacaactgt
agtaataaaaatactaatgtatttaatgatgaaaatgaaaatgacggaacagaaggtact
gatgatccttccatggacgtaaacactagtaacctactgttagcctcatgtgcatccgat
ggaagtatttgtctatgggatattaacaaaggaacaaaaagtaatgaagtaccaaggaca
tatggtattaataaaattggaaaaacagctgattataatataaaaatttatgaaaatact
ccaactctaagtcctttatgtacatggacaaataaaaataaagaaacatctttaaatgat
gtgttttttcatcccaaatttaataatgcccttggtgtgtgtgatgatgaaggatatatg
agtttatatgatataagaaaaaaatattttttttcaaaacctgaaataaattttaaagat
cataacgaaccaatgaatacattttcttttgataatttttcggattatattttttcatgt
ggatatactgatggattaatttctatatgggatatgagatttaataaagaatctttactt
aaaatagattatcatactcaaagtattaacagaattaaattttgcctgatgcagtcaggt
gtttttggatcttgttcagacgatggaattgcttgtatctgggatatttctagaaactca
gtaaattatgaacaagtcagaaaattagatgatgatatttataataaccccaaaaaaata
ccaaaacagttattgtttgttcatgggggtcatgttggaagtgtttatgatatgtcctgg
gcgaacagcaacacgttcttggtcgctactgttggggtcgataactcgctgcaagtgtgg
cacatgaatgaacagttcatatttcagtga
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integrated database retrieval system
