Plasmodium malariae: PMUG01_12078500
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Entry
PMUG01_12078500 CDS
T09444
Symbol
CPSF3
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 3, putative
KO
K14403
cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
Organism
pmal
Plasmodium malariae
Pathway
pmal03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pmal00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
PMUG01_12078500 (CPSF3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmal03021
]
PMUG01_12078500 (CPSF3)
03019 Messenger RNA biogenesis [BR:
pmal03019
]
PMUG01_12078500 (CPSF3)
Transcription machinery [BR:
pmal03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
PMUG01_12078500 (CPSF3)
Messenger RNA biogenesis [BR:
pmal03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
PMUG01_12078500 (CPSF3)
U7-dependent histone pre-mRNA processing factors
PMUG01_12078500 (CPSF3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-Casp
Lactamase_B_6
RMMBL
Lactamase_B
CPSF73-100_C
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B_3
DRMBL
Motif
Other DBs
NCBI-GeneID:
39870772
NCBI-ProteinID:
XP_028863463
UniProt:
A0A1D3SQK7
LinkDB
All DBs
Position
12:<3192283..>3195198
Genome browser
AA seq
971 aa
AA seq
DB search
MNNINVVCLGGASEVGRSCVIIESENTSIMLDCGIHPAFMGIGCLPIYDAYDISKIDFCL
ITHFHMDHSGALPYLINRTRFKGRIFMTEATKSICYLLWKDYSRIEKCMNLINKNKSSKN
KKDQDDENTSVEFESDINMNALYSSDDNIDDEYFNKVDLLYESYNGDDNSNNVLYEEDDI
DRTMELIETINFHQNLEFPNVKFTAYRAGHVIGACMFLVEINNVRFLYTGDYSREIDRHI
PIAEIPNIDVHVLICEGTYGIKVHDNRKKREIRFLNMLTNILNNKGKVLLPVFALGRAQE
LLLILEEHWESNRYLQKIPIFYISSMATKSLSIYETFINLCGDFVKNVVNEGKNPFNFKY
VKYAKSLDSILSYLYQDNNPCVIMAAPGMLQNGVSRNIFNIIASDNKSGVILTGYTVKGT
LADELKTEPEYVTINDKIVKRKCRFEQISFSAHSDFNQTKTFIEKLKCPNIILVHGYRNE
LNRLRDKLIEEKKYLSVFTPELLQKVSFHFEHNDHLISLGKLSTHIKKINKKMIKYTKLK
RAKDGETVEEANEDIDAAVAQDAKAEGNEVGETERFQQVGNITEEENKINSVKVSSISKM
EGKNNLITALSSNDAEGKGKCDKVKASNIISEDIEAVIITELKTVPIIIYPNDINKYTNL
KTALIDQIINIKYPYRFDLLYDLLSNVYEETLIDDNVIYVKDIKIIYCKEEKMIKINWFS
SPINDLVADSINFLVLEFLDTMASNKNLPIYDDVTDQHIYEMIISFVEENYANVERISKI
EIKNFLMHNGNKDEIEGKERKDSSFNDKRNNNNNNNSNNDNSNNDNSNNSKNSNYDNSER
SKNYDEERRNIGHCENYDCTAINQSKSMDSSYLSNKEHLKFGKNFNSSTRNFHAYDKVLL
DYIAKHANLELKNDEEIEEILKFDVKDNYNNDVQVFVDIDNREVICKEESILIKIKEILR
NIEEALLPMCF
NT seq
2916 nt
NT seq
+upstream
nt +downstream
nt
atgaacaacataaacgtcgtatgcttaggaggggcgagtgaagtaggacgatcatgcgta
attatcgaaagtgagaatacatcaattatgttagactgcggaatacaccctgcctttatg
ggaattggatgtttacccatttatgatgcatatgacatttcaaagatagacttttgcctt
ataacacattttcatatggatcatagtggggccttgccatatttaattaataggacccga
tttaaaggaaggattttcatgactgaggcaactaagagtatttgttatttactatggaag
gattattctcgtattgagaaatgcatgaatcttattaataagaataaaagtagtaaaaat
aaaaaagatcaggatgatgaaaatacatctgttgaatttgagagcgatataaatatgaac
gcgttatattcgagtgatgataatatagatgatgaatattttaataaagttgatttatta
tatgaaagttacaatggtgatgataatagtaacaatgttttatatgaggaagatgatata
gatagaacaatggaattaattgaaacaataaattttcatcaaaatttagaatttccaaat
gtgaaatttacagcatatagggcaggacatgttattggggcatgtatgtttttagttgag
ataaataatgtgcgttttttatatacaggtgattatagtagagaaatagataggcatata
cctattgcagaaatccccaatattgatgttcatgtattaatatgtgaaggaacatatggt
ataaaagttcatgataatagaaagaaaagagaaattcgttttttaaacatgttaacaaat
atattaaataataaaggtaaggtacttttacctgtttttgccttaggtagagcacaagaa
ttattattaatattagaagaacattgggagagtaacaggtatttgcaaaaaattcctatt
ttttatatctcttctatggctacaaaatcgttgagtatatatgaaacttttataaattta
tgtggtgattttgtgaaaaatgtagttaatgaaggtaagaatccattcaattttaaatat
gtcaaatatgcaaaatctcttgattctatattaagctatttatatcaagataataatcct
tgcgttataatggcagcacctggtatgttacaaaatggggtatcaagaaatattttcaat
attatagcatctgataataaaagtggagtgatattaacaggatatacagttaaaggaact
ttagcagatgaactaaaaacagaaccagaatatgttacaattaatgataaaattgttaaa
aggaaatgtcgttttgagcaaatatcttttagtgctcattcagactttaatcaaacgaaa
acatttattgaaaagttaaaatgtccaaatattatcctagtacatggttatagaaatgaa
ctaaacaggttaagagataaattaattgaagagaagaagtatctatccgtttttactcct
gaactattgcaaaaagtttcttttcattttgagcataacgaccatctcatttctttagga
aaactctccacgcacattaaaaagatcaacaaaaaaatgataaaatatactaaattaaaa
agagcaaaggatggtgaaactgtggaggaggcaaatgaagatatagatgcggcagttgcg
caagatgcaaaagcggagggtaatgaagtaggagaaactgaaaggtttcaacaagttgga
aatattacagaagaagaaaacaaaataaattctgttaaagtgagtagtatttcaaaaatg
gaggggaaaaacaatttaataactgcacttagtagcaatgatgcagaagggaaaggaaaa
tgtgataaagtcaaagcttcaaacataatttctgaggatatagaagcagttataataaca
gaactgaaaacagtaccaataattatttatcccaatgatattaataaatatacaaattta
aaaactgctttaattgatcagataattaatataaagtacccatatagattcgatttgtta
tatgatcttttgagtaatgtatatgaagaaacccttatagatgataatgtaatatacgtg
aaagatataaaaattatttattgcaaagaagagaaaatgataaaaataaattggttttca
agtccgattaatgatctagttgctgatagtattaattttttagtacttgaatttttggat
acgatggcatctaataaaaatttacctatttatgacgatgtgacagatcagcatatatat
gaaatgataatctcgtttgttgaggaaaactatgcaaacgttgaaaggatatctaaaata
gaaataaaaaattttttaatgcataatggtaacaaggatgaaatagagggtaaggaaaga
aaggactcatcatttaatgataaaaggaataataataataataataatagtaataatgat
aatagtaataatgataatagtaataatagtaaaaacagtaattatgataattctgaaaga
agtaaaaattatgacgaagagaggagaaatattgggcattgtgaaaattatgattgtact
gctattaatcaaagcaaaagcatggatagctcttatttaagcaacaaggaacatttaaaa
tttggaaaaaattttaacagtagtactagaaattttcatgcgtatgataaagtactctta
gattatattgcaaagcatgctaatttagagctaaaaaatgatgaagaaattgaggaaata
ctgaaatttgatgtaaaagataactataacaacgatgttcaggtttttgttgatatagat
aatagggaagtcatttgtaaggaagaaagcattttaataaaaattaaagaaattttaaga
aacatagaagaagcactgctacccatgtgcttttaa
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