Plasmodium malariae: PMUG01_14031600
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Entry
PMUG01_14031600 CDS
T09444
Name
(RefSeq) general transcription factor IIH subunit 2, putative
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
pmal
Plasmodium malariae
Pathway
pmal03022
Basal transcription factors
pmal03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pmal00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
PMUG01_14031600
09124 Replication and repair
03420 Nucleotide excision repair
PMUG01_14031600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmal03021
]
PMUG01_14031600
03400 DNA repair and recombination proteins [BR:
pmal03400
]
PMUG01_14031600
Transcription machinery [BR:
pmal03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
PMUG01_14031600
DNA repair and recombination proteins [BR:
pmal03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
PMUG01_14031600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ssl1
C1_4
Tfb4
VWA_2
Pex19
Motif
Other DBs
NCBI-GeneID:
39871627
NCBI-ProteinID:
XP_028864217
LinkDB
All DBs
Position
14:1042499..1044591
Genome browser
AA seq
380 aa
AA seq
DB search
MQNTQSSENKATLVEEVVRDFDKNEVFEEITAKFTWEQDVERSWNLLVENNGVLQHVSQE
NLENNSKQKYKKDQIASLRKGIFRHIIILFDMSSSMKERDFKPDRINVVLESLKNSSAKL
IQSLTSNIDDILSSLLKERSNGLQGSPSLQEGLEIAHDLLIDMPMYGTKEIVIMYSSIRT
CDKNNILNILELLVKNNIYVNCISIAPEMHILKYICERTKGIYKICTSKNELLNEINSVA
ETPLWMFGMEPQLIHICFPVKKKISTQIMCSCHNNLNTDTYICNFCNSYTCKIPSKCKVC
GIHLISMHDLSHITNNLQESPLFIEMKNEKSAHYSCSSCHQKLYEKVSQCTKCKHVFCVE
CDIFIHEDLNQCPFCLIHHS
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaatacccaaagttctgaaaacaaagctaccttagttgaagaagttgtaagagat
tttgataaaaatgaagtttttgaagaaataactgctaagtttacgtgggaacaagatgtt
gaaagatcgtggaacttacttgtagaaaataacggtgttttacaacatgttagtcaagaa
aatttagaaaataatagtaaacaaaaatataaaaaagatcaaattgcttccttaagaaaa
ggaatattcagacatataataatactttttgatatgtcgagtagcatgaaagaaagggac
tttaagccagatagaataaatgttgtcctggaatctttaaaaaacagttcagcaaaatta
attcaatcattaacatcaaatatagatgacatattaagttcattgttaaaggaaagaagt
aatggtcttcaaggttcaccatcactacaagagggcttagaaattgcgcatgatttatta
attgatatgcctatgtatggaacgaaagaaatagtaataatgtatagttctataagaaca
tgtgataaaaataatatattaaatattttggaattattagtaaaaaacaacatttacgta
aattgtatttctattgccccagaaatgcatatattaaaatatatatgtgaacgaacaaaa
ggtatttataaaatatgtacaagtaaaaatgaattattaaatgaaataaatagtgttgca
gaaacacctttatggatgtttggaatggaaccacaattaatacatatatgttttccagta
aaaaaaaaaataagtacacaaataatgtgctcttgtcataataacctaaacacagatacg
tatatatgtaatttctgtaatagctatacatgcaaaataccatcaaaatgtaaagtatgt
ggtatacatttaatttctatgcatgatttatcacatattacaaataatcttcaagaatct
cctttatttattgaaatgaaaaatgaaaaaagtgcgcattactcttgttcatcatgccat
caaaaactttatgaaaaagtatcacagtgtactaagtgtaaacatgttttttgtgttgaa
tgtgatatatttatacacgaggacttgaatcagtgtcctttttgtttaatccatcactcg
tag
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