Plasmodium malariae: PMUG01_14069000
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Entry
PMUG01_14069000 CDS
T09444
Symbol
SF3B3
Name
(RefSeq) splicing factor 3B subunit 3, putative
KO
K12830
splicing factor 3B subunit 3
Organism
pmal
Plasmodium malariae
Pathway
pmal03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pmal00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PMUG01_14069000 (SF3B3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmal03021
]
PMUG01_14069000 (SF3B3)
03041 Spliceosome [BR:
pmal03041
]
PMUG01_14069000 (SF3B3)
03036 Chromosome and associated proteins [BR:
pmal03036
]
PMUG01_14069000 (SF3B3)
Transcription machinery [BR:
pmal03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
PMUG01_14069000 (SF3B3)
Spliceosome [BR:
pmal03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
PMUG01_14069000 (SF3B3)
Complex B
PMUG01_14069000 (SF3B3)
Complex C
U2 SnRNP specific factors
PMUG01_14069000 (SF3B3)
Chromosome and associated proteins [BR:
pmal03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
PMUG01_14069000 (SF3B3)
TFTC complex
PMUG01_14069000 (SF3B3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
Beta-prop_BBS7
Beta-prop_LRRK2
Motif
Other DBs
NCBI-GeneID:
39872001
NCBI-ProteinID:
XP_028864583
UniProt:
A0A1D3TF94
LinkDB
All DBs
Position
14:2788877..2793716
Genome browser
AA seq
1297 aa
AA seq
DB search
MPVLYHLTLQKPTAITRTVYGNFSNPRAHEIIVAKGQVLELLRADKQGKLNLIVSKDIFG
IIRCLQTFRLTGSNKDYIVIGSDSGRLVILEYSNDKNDFIRVHCETYGKSGIRRIIPGEY
IAVDPKGRALMICAIERQKYVYILNRDNKENLTISSPLEAHKTHSICHDVVGVNVGFENP
MFASIEQNYEHLDKQLSSSPNDLEYPKKGLCFWEMDLGLNHVIKKFTLPIHISAHLLIPI
PGGQQGPSGIIVCCENYLVYKKLDHEDVFCSYPRRLEISQDKNISIVCWTMHRIKKFFFI
LAQSEYGDLYKIEMDHEDGIVKQIICKYFDTVPIANSICVLKSGSLFVAAEFGNHFFYQF
SGIGDDNNEAMCTSNHPMGKNAIIAFKTQKLKNLFLVDQIYSLSPILDMKILDAKNSNSS
QIYTLCGRGPRSSLRILQHGLSIEELADNELPGKPKYIWTVKKDNASEYDGYIVVSFEGN
TLILEIGETVEEVYDSLLLTNVTTLHINILYDNSFIQVYDTGIRHIRGKVVQEWVSPKNK
QIKAASSNNAQIVISLSGGELIYFEIDQSHTLTEIFRKNLNVEVLCLSMQQTSENRLRAN
FLAVGCLDNVVRVLSIEKDKYFKQLSTYILPNNSSPQDICISEMKELGNDKERNVLFLNI
GLNTGVLLRSIVDPIAGTLSNHYSKYLGAKSVKICHVNVNKNPALLVLCEKTYLCYVHQG
KYVYTPLNYDMLEYASSFYSEQCSDGYVAISGNSLRIFRFYRLGEVFSQNILHLTFTPRK
IVPLPFPSLFYDHDTSIEIETKRDIRMLAVIEADHNSYDENTQKEIQRALKDIKLDVDDS
NNNSGEPNVLSDSHSSMEKKGEVEGEEEVEGEVEVEGEIEVEVVDGKKKKKKNSINEGAS
EQCGENSDKEEDDDEEELLYDRIGTLKAGYGKWGSCIKIVNPINLEIVDKIALEMEEAAL
SVCACELEALHCLIVGTTSNMSLKNRTVQAASLRVYTYDINYKLNLLHITPIEDQPFSFC
PFNGRLIASVGNKLRIYALGKKKLLKKCEYKDIPEAIVSIKVSGDRIFASDIRDSVLIFF
YDSNQNTLRLISDDIIPRWITCSEILDHHTIMAADKFDSVFILRVPEEAKQEEYGISNKC
WYGGEIMNGSNKNRRLEHIMSFHIGEIVTSLQKVRMSPTSSECIIYSTIMGTIGAFIPYD
NKEELELTQHLEIILRTEMPPLCGREHIFFRSYYHPVQLNKLVCVYYVKLSQHVVDGDLC
EQFSSLSYDVQKKVAADLERTPDDILRKLEDIRNKIL
NT seq
3894 nt
NT seq
+upstream
nt +downstream
nt
atgcccgtgttgtatcatctaacattacaaaaaccaactgccattacaagaacggtgtat
gggaatttttctaatcctagagcgcacgaaataatagttgctaagggtcaggtgttggaa
ttactaagagcagataaacaaggaaaattaaatttgatcgtttcgaaggatatatttggt
ataataagatgcttgcaaacatttcggttaactggaagtaataaggattatatagttata
ggtagcgattcaggtagattagttatattagaatacagtaatgataaaaatgattttata
agagtacactgtgaaacatatggtaaaagtggaatacgaaggataataccaggggaatat
attgcagtagatcctaagggaagagcattaatgatatgtgctatagaaagacagaaatat
gtatatattttaaatagagataataaagaaaatttaactattagtagtccattagaagca
cataaaactcattctatatgccacgatgtagtgggtgtaaatgtaggttttgaaaaccca
atgtttgcatctattgaacagaattatgaacacttagataaacaattatcaagtagtcct
aacgatttagaatatcctaaaaaaggattatgtttttgggaaatggatttagggttaaat
catgtaatcaaaaaatttaccttgcctattcatatttctgcacatttacttattccaata
cctggtggacaacaaggacctagtggtattatagtatgttgtgaaaattatttggtttat
aaaaagttagatcatgaagatgtattctgttcatatccaagaagacttgaaataagtcaa
gataaaaatatttcaatagtttgttggactatgcatagaataaaaaaatttttttttatc
cttgcccagtcagaatatggagatttatataaaattgaaatggatcatgaagatggtatt
gtaaaacaaataatatgtaaatattttgatacagttcctattgccaattcgatatgtgta
ttaaaatctggttcactttttgtagcagcagaatttggaaatcattttttttatcaattt
tctggaataggagatgataacaatgaagctatgtgtacatctaatcatcccatgggcaaa
aatgcaatcatagcttttaaaacgcagaagttgaaaaatttatttttagtagatcaaata
tattccctctctccaatattagatatgaaaatattagatgcaaaaaattcgaattcttca
caaatatatactttatgtggtaggggtcctagatcctcgctccgtattcttcaacatgga
ttaagtatagaagagctagcggataatgaattaccaggtaaacccaaatacatatggaca
gttaagaaagacaatgcaagtgaatatgatggatatatagtagtaagttttgaagggaat
acattaatactagaaataggagaaacagtagaagaggtatacgatagtttactcttaaca
aatgttacaacgttacatataaatattttatatgacaactcgtttattcaagtgtacgat
actgggattagacatattagaggaaaggtagtacaagaatgggtatctccaaaaaataaa
cagataaaagcagcttcatcaaataatgcacaaattgttatatcccttagtgggggtgaa
ctcatttattttgaaatagatcaatcacataccttaacggaaatttttaggaaaaattta
aatgtggaagttttatgtttgtctatgcaacaaacttctgagaatagactaagagcgaat
ttcttagctgttggttgtttagacaatgttgtaagagtcttatctattgaaaaagataaa
tattttaaacaactgtcgacttatatcttaccgaataactcttcaccacaagatatatgc
atttctgaaatgaaagaattaggtaatgacaaagaaaggaatgtattgtttctaaatatt
ggattgaacacaggggtattgttaagaagtattgttgatcctattgcaggcacattgagt
aatcattactctaaatatttaggagcaaaaagtgtaaaaatttgtcatgttaatgtaaat
aaaaatcctgctctcttagttctctgtgaaaaaacatatctatgctatgtacatcaagga
aaatatgtatacactcctttaaattatgatatgttagaatatgcttcttctttttattct
gaacaatgttcagatggatatgtagctatatctggaaatagcttacgaatctttagattt
tacagattaggtgaagtgttcagtcaaaatattttacatcttacctttactccgaggaag
attgtacccttgcctttcccctctttgttttatgaccatgatacgtccatcgaaatagaa
acaaagagggatatacgaatgctagcagtcatcgaggcagatcataattcctatgatgaa
aacacacaaaaggaaattcaaagagcgttaaaagatatcaagctagatgtggacgattcg
aacaacaatagtggagaaccgaatgtattgtccgattcacattcaagtatggaaaaaaaa
ggagaagttgaaggagaagaagaagtagaaggagaggtagaagtagaaggagagatagaa
gtagaagtagtggatggtaaaaaaaaaaaaaaaaaaaattccataaatgagggtgcttcg
gagcaatgtggtgagaacagtgataaagaggaggatgatgacgaagaggaactattgtat
gaccgcattggtacgttgaaagcggggtacggaaaatggggatcatgcatcaaaattgtg
aacccgataaatttagaaattgtagataaaatagctctagaaatggaggaggcagcactg
agtgtatgtgcatgtgagttagaagcattacattgtttaatagtaggtacaacatctaat
atgtctttaaaaaatagaactgtgcaagcagcttctttacgtgtatatacttatgatata
aactataaactaaatttattacatataacaccgatagaagatcaacctttttccttttgc
ccattcaatggaagacttatagcttctgttggaaataaattaagaatttatgcattaggg
aaaaaaaaattactaaaaaaatgtgaatacaaagatataccagaagccattgtatctatc
aaggtttctggggatcgtatatttgcatctgacataagggattctgtcttaatttttttt
tatgattctaatcaaaacacattaagattaatttcggacgatattatccccaggtggatt
acctgctctgaaattcttgatcatcacactatcatggctgcggacaagttcgattctgta
tttatcctgcgggtgcccgaggaagcaaagcaagaagaatatggcatatcgaacaagtgc
tggtatggtggggagatcatgaatggttcaaacaagaatagaaggctggagcatattatg
agtttccatatcggagagatagtaacttctttgcaaaaggtcaggatgtcacctaccagt
agtgaatgcataatatactcgaccattatgggaactatcggggctttcattccgtatgat
aataaagaagagctggaattaacacaacacctagaaataattttaaggaccgagatgcct
ccactttgtggtagggagcacatattttttcgctcgtattaccaccctgtccagcttaac
aaactagtgtgtgtatattatgtcaaactttctcagcacgttgtcgacggggatttatgt
gagcagttttcaagtttatcatatgatgttcagaaaaaagttgctgcagatttagagagg
acaccagacgatattttaaggaaattggaagatatcagaaataaaatactttag
DBGET
integrated database retrieval system
