Plasmodium malariae: PMUG01_14070100
Help
Entry
PMUG01_14070100 CDS
T09444
Symbol
XAB2
Name
(RefSeq) pre-mRNA-splicing factor SYF1, putative
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
pmal
Plasmodium malariae
Pathway
pmal03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pmal00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PMUG01_14070100 (XAB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmal03019
]
PMUG01_14070100 (XAB2)
03041 Spliceosome [BR:
pmal03041
]
PMUG01_14070100 (XAB2)
Messenger RNA biogenesis [BR:
pmal03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
PMUG01_14070100 (XAB2)
Spliceosome [BR:
pmal03041
]
Complex B
Other components
Prp19-related factors
PMUG01_14070100 (XAB2)
Complex C
PMUG01_14070100 (XAB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_CNRKL1_N
HAT_Syf1_M
TPR_2
BTB_SANBR
TPR_ELP1
HAT_PRP39_N
Motif
Other DBs
NCBI-GeneID:
39872012
NCBI-ProteinID:
XP_028864594
UniProt:
A0A1D3TFE6
LinkDB
All DBs
Position
14:complement(2844850..2848493)
Genome browser
AA seq
989 aa
AA seq
DB search
MELYGELYDYDDLFFNENNVTSREEAFYEEKDYFVDEMNYSNKFINSYKNTENENYLKSI
EIDIKSNLEKVSTKYLFLYINKFKEKNIKKENNLYVLNMYDIHLKKDKLNVLETENNIVE
YCLTELINGGRKSNVKGGLKKGIMYYDSTVQLGCSHIGNEDDEEEHEQEKLGYEEEEQDY
DVGEVKARGYGKEQSSDEDENNSSNGSARTKEYYLRRIYQVVLKYFPFSFKLWYNYIRDS
IEMIKDVYYDNRREYEQVNAIFEKCLLYMYHFKSIYIMYIQFLYIQRKVQKIREVFNRSL
QNVFLNQHEDLWFYQLEYNEKINNKLINYEYIKRYITIYPEQVIFLFDHYVKYKMYKHAI
GTFFYILNCEEETLDLGNKSKYDLYKEIFNLISSAKVLNNDVMEILKKNINIFKNYENVT
SIFILLANNYVYEGRWNKAMDSYEEGISECYTVNDFSILFENYIETLKVLIDLKINQQEE
KRNTSTSDLYVEEEKEAIDNELISEGIKPNDDFVIDLYMEKINYLLDVRKIFIADIKLKN
NKNNVYIWLSKIDAVANDTDKVDLFNKCLIHFEHNEYIGRLSDVYISYAYYYYNRNKYDE
SVKVFHRAIKEKNFKNVNEMANIFCSWVELELLQANYKEALNVARLAIDIGRGKSFKGKA
ENGTTFNVHNTSRSGENNAISIYSRGLRDSTDGDVLAHTEFNLLNSTKLMCLILDMEINY
GTVETSISMFDVLYHAKSITVKMVLSFANFLYTHKYFNECFKIYEKAISIFHYPYLYPIY
ANYINKYIERYKDKNISYVRELFKQAIYGIDNKTYIPKEFAKYIFFMYALFEENYGFLKN
SLSIYKEAIPFLEEKDKATFYKMFIWKISKSYGVHKAREAFEEAIQTLKDDDFTNPLAYS
KFYQVANLDTMSVKIDWREFEALHGNEHTFRDMIRIKRSVLSIFTSSHRGVKEIEKDENS
NLNVIENTKRILQEMIENEERLQKKIKNG
NT seq
2970 nt
NT seq
+upstream
nt +downstream
nt
atggaactgtacggagagttgtacgactatgatgatttattttttaacgagaacaatgtt
acctcgagggaggaagcgttttatgaagaaaaagattattttgtcgatgagatgaattac
agtaataagtttataaacagttacaaaaatacagaaaatgagaattatttgaaaagtatt
gaaatagatataaagagcaatttagaaaaagtgtctacaaaatacttatttttatatatt
aataaatttaaggaaaagaatataaagaaggaaaacaatttgtatgttttaaatatgtac
gatatacatttaaaaaaagataagctcaacgtgttggaaacagagaacaatatcgtggag
tactgtttgacagagttaataaatggaggtagaaagagtaacgtaaaggggggtctaaaa
aagggcatcatgtattatgatagtactgtccagttagggtgttcacatattggaaatgag
gatgatgaggaggagcacgaacaggaaaagctaggttatgaggaggaagaacaggattat
gatgtgggtgaggttaaagcacgtgggtatggtaaagagcagagcagcgatgaagatgaa
aataacagtagcaatggcagtgcgcgcacgaaggagtactacttgcgcagaatttaccaa
gttgttctgaagtacttcccgttcagcttcaagctgtggtataactacataagagatagc
atagagatgataaaggatgtctattacgataacagaagagaatatgaacaagtgaatgcg
atttttgaaaagtgtctattatatatgtaccattttaagtccatctatattatgtacatt
caatttttatatattcaaaggaaagttcaaaagataagagaagtattcaatcgctcttta
cagaatgtttttttaaatcaacatgaagatttatggttttatcaattagaatataatgag
aaaataaacaataagttaattaattatgaatatattaaaagatatataacaatttatcct
gaacaagtcatatttttatttgatcattatgtaaaatataaaatgtataaacatgcaata
ggtacttttttttatatacttaattgtgaagaggagacgttagatttaggaaataaatca
aaatatgatttatataaagaaatatttaatttaattagttcagctaaagttttaaataat
gacgttatggaaattttgaaaaaaaatataaatatttttaaaaattatgaaaatgttaca
tctattttcattctattagcaaataattatgtgtacgagggtagatggaataaggctatg
gattcatatgaagaggggatatcagaatgttacacagttaatgacttttcaattcttttt
gaaaactacattgaaacgttgaaggtgttgatagatttgaaaataaatcaacaagaggaa
aaaaggaatactagcacaagtgatttatatgttgaagaggagaaagaagcaatagacaat
gaactaatttcagagggaataaaaccaaatgatgattttgtaatcgatttgtatatggaa
aaaataaactaccttttggatgtaaggaaaatatttatagctgatattaaactgaaaaac
aataaaaataatgtgtacatatggttaagcaaaattgatgcagttgcaaatgatactgat
aaagtagatctcttcaacaagtgtttaatacattttgagcataatgaatacatagggaga
ttgagtgatgtatatattagttatgcatactactattataacaggaacaaatatgacgaa
tctgtaaaggttttccatagagctataaaagaaaaaaatttcaaaaatgtcaacgaaatg
gcaaatatattttgctcatgggttgaactagaattactgcaagcaaattacaaggaagcg
ttgaatgtagccaggttggctattgatattggcagaggaaaatcctttaaagggaaagca
gaaaatggaactacatttaatgtgcacaatactagtagaagcggggaaaacaatgcaatc
agtatttacagtagaggtctacgggacagtactgatggcgatgtgctcgcacataccgag
tttaaccttctaaactcaaccaaattgatgtgcttaattcttgatatggaaataaattac
ggcacagttgaaacgtccataagcatgtttgatgttttgtatcatgcaaaaagtattact
gtgaaaatggttttgtcctttgctaattttctgtacacacataaatactttaatgaatgt
tttaaaatttacgagaaagctatttctatatttcactacccttatttataccccatttat
gccaattatattaataaatacattgagagatataaagacaaaaatatttcatatgtgcgt
gaactgtttaaacaagctatttatggtattgacaacaaaacgtatattccaaaagaattt
gctaagtatatttttttcatgtatgctttatttgaagaaaattatggctttttgaagaat
tcactgagtatttataaagaggctattccctttctggaggaaaaggacaaagctacattt
tataagatgttcatttggaagatatccaaatcctatggagttcacaaagccagggaagca
tttgaggaggctattcaaacgctaaaggatgacgattttactaatccattggcctattcg
aagttttaccaggttgcaaaccttgacacaatgagcgttaagattgattggagagaattt
gaagcattgcatggaaacgagcacaccttcagagacatgataagaataaaaagaagcgtc
ctaagcatatttacgagttcgcacaggggagttaaggagatagaaaaagacgaaaactcg
aacttgaacgtaatagaaaacacgaagaggatactgcaggaaatgattgaaaatgaagag
aggcttcaaaaaaaaattaaaaatggctaa
DBGET
integrated database retrieval system
