Pseudomonas maumuensis: KSS90_01920
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Entry
KSS90_01920 CDS
T07719
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
pmam
Pseudomonas maumuensis
Pathway
pmam03030
DNA replication
pmam03430
Mismatch repair
pmam03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pmam00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KSS90_01920
03430 Mismatch repair
KSS90_01920
03440 Homologous recombination
KSS90_01920
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pmam03032
]
KSS90_01920
03400 DNA repair and recombination proteins [BR:
pmam03400
]
KSS90_01920
Enzymes [BR:
pmam01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KSS90_01920
DNA replication proteins [BR:
pmam03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KSS90_01920
DNA repair and recombination proteins [BR:
pmam03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KSS90_01920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
QXH56996
UniProt:
A0ABX8NLY4
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All DBs
Position
complement(408344..409054)
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AA seq
236 aa
AA seq
DB search
MNLFAWLRPTAPELDTALQRRLAALPGPAPLGVCSLREQRWVVLDLETSGLNLNRDQVLS
IGAVAIEDGAIDLGRPFERTLRRPEQKTNASVLIHGLGPSALAAGCEPAEALLDLMTFIG
DSPVLAFHAPFDQRMLARALKDSLGLRLQHPFLDVAELAPMLNPDTVLREAGLDDWIARF
GLEVQARHHASADAQVTAELALILFSQARRQQLDSPLQLEQRLRQWRRRKAQHHGL
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
gtgaacctgttcgcctggttgcgccccacagcccccgaactcgatacggcgctgcagcgg
cgcctggccgcgctgcccggccctgcgcccctgggcgtgtgctccctgcgcgaacagcgc
tgggtggtgctggacctggagaccagcggcctgaatctcaatcgcgatcaggtgctgtcg
atcggcgcggtggccatcgaggacggtgccatcgacctcggtcggccgttcgagcgaacc
ctgcgccgccccgaacagaaaaccaacgccagcgtgctaatccatggcctgggccccagc
gccctggccgccggctgcgaaccggccgaagccctgctcgacctgatgacgttcatcggc
gacagtccggtactggcgttccatgccccgttcgaccagcgcatgctggcccgggcgttg
aaagacagcctgggcctgcgcctgcagcatccgtttctcgacgtggcggagctcgcgccg
atgctcaaccccgacaccgtgctgcgcgaggccgggctggacgactggatcgcccgtttc
ggcctcgaagtccaggcccgccaccatgccagcgccgatgcccaagtcactgcggagctg
gcgttgatcctgttcagccaagcccgccgccagcaactggacagcccgttgcagctggaa
cagcggctacgccagtggcgacgacgcaaggcgcagcaccacggtctctga
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