Pseudomonas maumuensis: KSS90_02885
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Entry
KSS90_02885 CDS
T07719
Symbol
rtcR
Name
(GenBank) RNA repair transcriptional activator RtcR
KO
K14414
transcriptional regulatory protein RtcR
Organism
pmam
Pseudomonas maumuensis
Brite
KEGG Orthology (KO) [BR:
pmam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pmam03000
]
KSS90_02885 (rtcR)
Transcription factors [BR:
pmam03000
]
Prokaryotic type
Other transcription factors
Others
KSS90_02885 (rtcR)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcR
Sigma54_activat
Sigma54_activ_2
AAA_5
Mg_chelatase
AAA
AAA_16
AAA_22
AAA_30
MCM
NACHT
AAA_2
AAA_33
AAA_7
AAA_19
bpMoxR
ATPase_2
Motif
Other DBs
NCBI-ProteinID:
QXH57168
LinkDB
All DBs
Position
complement(597023..598606)
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AA seq
527 aa
AA seq
DB search
MTKSLVAIGFLGTTLDRNGKGAARWNKWRPTIGLCQQPDLPLDRLELIHGPSARDLGLAE
RIRADIQQVSPGTEVRLHPLALRNPWDFEEVYGALHDFASAYSFDTEHEDYLVHITTGTH
VAQICWFLLTEARYLPARLVQTSPSRKHDENSDPAGIATLIDLDLSRYDPIASRFRREQV
EGQSLLKSGIATRNPDFNRTIEQIERVALRSKAPMLLVGPTGAGKSFLARRVHELKRGRH
QLGGRFIEVNCATLRGDGAMSTLFGHAKGAFTGAQNARDGLLRAADGGMLFLDEIGELGA
DEQAMLLKAIEEKRFFPLGADREVESDFQLIAGTHRDLRAKVADGSFREDLFARINLWTF
ALPGLAQRREDIEPNLDFELQRHAREQGRQVRFNLEAKRRYLAFAHASEARWAGNFRELS
ASITRMATLADSGRIDEALVEEEIERLRYAWGLESATEPLLDGRELDLFDQVQLRAVIDA
CRRAPSLSEAGRQLFAVSRQDKANPNDADRLRKYLARFGLDWQQLKS
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atgaccaagtccctcgtcgccatcggttttctcggcaccaccctcgaccgcaacggcaag
ggtgccgcgcgctggaacaagtggcggccaaccatcggcctgtgccagcaacccgacctg
cctctggaccgcctggaacttatccacggccccagcgcacgcgatctcggcctggccgag
cgaatccgcgccgacatccagcaggtctcgcccggcaccgaggtgcgcctgcacccgctg
gcgctgcgcaacccgtgggatttcgaggaggtctacggcgccctgcacgacttcgccagc
gcctacagcttcgacaccgagcacgaggactacctggtgcatatcaccactggcacccac
gtcgcgcagatctgctggttcctgctcaccgaggcgcgctacctgccggcgcgcctggtg
cagacctcgccctcgcgcaagcacgacgaaaacagcgacccggccggcatcgccaccctg
atcgacctcgacctgtcgcgctacgacccgatcgcctcgcgctttcgccgcgaacaggtc
gaggggcagtcgctgctcaagtccggcatcgccacgcgcaacccggatttcaaccgcacc
atcgagcagatcgaacgggtcgccctgcgctcgaaggcgccgatgctgctggtcggcccg
accggcgccggcaagtcgttcctcgcccgccgcgtccatgagctcaagcgcggtcgtcac
caactgggcggtcgcttcatcgaggtgaactgcgccaccctgcgcggcgacggcgccatg
tcgaccctattcggccacgccaaaggcgccttcaccggcgcgcagaacgcccgcgacggc
ctgctgcgcgccgccgacggcggcatgctgttcctcgacgaaatcggcgagctgggcgcc
gacgaacaggccatgctgctcaaggccatcgaagaaaagcgcttcttcccgctgggcgcc
gaccgtgaagtggaaagcgacttccaactgatcgccggcacccaccgcgacctgcgcgcc
aaggtcgccgacggctcgttccgcgaagacctgttcgcccgcatcaacctgtggaccttc
gccctgccgggcctggcccagcggcgcgaggacatcgagccgaacctggatttcgagctg
cagcgccatgcccgcgagcaaggccgccaagtgcgcttcaacctcgaagccaagcgccgc
tacctggccttcgcccacgccagcgaagcacgctgggccggcaacttccgcgagctgtcg
gcatcgatcacgcgcatggcgaccctggccgacagcgggcgcatcgacgaagcactggtc
gaggaagagatcgagcggctgcgctatgcctggggcctggaatcggcaaccgagccgctg
ctggacggccgcgagctggacctgttcgaccaggtacaactgcgggcggtgatcgatgcg
tgccgccgcgccccgagcctgtccgaggccgggcgccagctgttcgcggtgtcgcgccag
gacaaggccaaccccaacgacgccgaccgcctgcgcaagtacctggcgcggttcgggctc
gactggcagcaactaaagtcgtag
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