Pseudomonas maumuensis: KSS90_03840
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Entry
KSS90_03840 CDS
T07719
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
pmam
Pseudomonas maumuensis
Pathway
pmam03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pmam00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
KSS90_03840 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmam03400
]
KSS90_03840 (recD)
Enzymes [BR:
pmam01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
KSS90_03840 (recD)
DNA repair and recombination proteins [BR:
pmam03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
KSS90_03840 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
RecD_N
AAA_30
AAA_11
UvrD_C_2
Helicase_RecD
SH3_13
AAA_22
Viral_helicase1
UvrD-helicase
AAA_16
TraI_hel_assoc_N
SLFN-g3_helicase
AAA_28
AAA_17
PhoH
T2SSE
nSTAND3
NTPase_1
NACHT
Motif
Other DBs
NCBI-ProteinID:
QXH57341
LinkDB
All DBs
Position
819459..821534
Genome browser
AA seq
691 aa
AA seq
DB search
MSRNLDDLLPTPLQAEHLSALAPLSASHDLLALLDRWVERGWLRALDRAFVSFLEERAPG
SDPLVLLAAALASHQLGHGHVCLDLRQTLAEPDFALSLPPEGDALAGPLLLPSQLLASLD
LGTWLQRIAESPLVAAGDSVEQRARPLVLSAERLYLRRYWAYERRIDGALHERLARHQPQ
PADLAQRLAQLFDGGSAAGAVDWQKLACALATRAGFSVITGGPGTGKTTTVVRLLALLQG
PAVEQGRPLRIRLAAPTGKAAARLTESIGQQVERLQVDVEVRAQIPTEVSTVHRLLGSRP
GSRHFRHHAGNPLPLDVLVVDEASMIDLEMMANLLDALPPNARLVLLGDKDQLASVEAGA
VLGDLCRDAEDGCYWPQTLVWLEQVGGQSLAGIGLKQGDGQRNPLAQQIVMLRHSRRFGE
GSGIGQLARLVNRQQALEARALLAARPADVHCLTLGGEHDKRFDRLLLDGLGQGAEGPQG
YRGYLRSIGRLRPPPGTPGDDPRWERWAAEVLQSFEAFQLLCAVRRGAWGVEGLNERVAR
VLHNAGLIDSQQPWYEGRPVLVTRNDYGLGLMNGDIGIALRVPDEQGEALLRVAFPRNDG
SGGVRFVLPSRLSEVETVFAMTVHKSQGSEFSHTALVLPDALNPVLTKELVYTGITRAKH
CFSLIEPRAGVFEEAVGRKVRRVSGLMLEQV
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atgagccgcaacctcgatgacctgctgcccacgccattgcaggcggagcatctgagcgcc
ctggcgccgctgagcgccagccacgacctgctggcgttgctcgatcgctgggtcgagcgc
gggtggttgcgtgccctggaccgggccttcgtgagctttctcgaggagcgggcgccaggc
agtgaccctttggtcctgctcgccgcggcgctggccagtcaccagctggggcatgggcat
gtgtgcctggatctgcgccagacactcgctgaaccagacttcgccctgtcgctgccaccg
gaaggcgatgccctcgccgggccgctgctgctgccttcgcaactgctagccagccttgac
ctgggtacctggctgcaacggattgccgagagcccgctggtcgcggcgggcgatagcgtc
gaacagcgcgcccggccattggtgctgagcgccgagcgcctgtatctgcgccgttactgg
gcctacgaacggcggatcgacggcgccttgcatgagcgtctggcgcgtcatcagcctcag
cctgccgatcttgcccagcgcctggcgcagctgttcgacggcggctcggcggccggcgcg
gtggactggcagaaactggcctgcgccctggccacccgtgccggtttcagcgtgattacc
ggcggccccggcaccggcaagaccaccaccgtggtacgcctgctggcgttgttgcagggg
ccggcggtcgagcaaggccgaccgctgcgtatccgcctggcggcaccgaccggcaaggcc
gcggcgcgcctgaccgagtccattggccagcaggtcgagcgcctgcaggtggacgttgag
gtacgggcgcagatccccaccgaggtcagcaccgtgcatcgcttgctcggcagccgcccg
ggctcgcggcacttccgccatcatgccggcaacccgttgccgctggatgtgctggtggtc
gatgaagcctcgatgatcgatctggagatgatggccaacctgctcgacgccctgccgccg
aatgcgcggctggtgctgctgggcgacaaggaccagctggcttcggtggaagccggggcg
gtgctgggcgacctgtgccgcgacgccgaggacggctgctactggccgcagaccttggtc
tggctggagcaggtgggtgggcagtcgctggcgggcatcggcctgaagcagggcgatggc
cagcgcaatccgctggcccagcagatcgtgatgctgcgtcattcgcggcgcttcggcgaa
ggcagcggcatcggccagctggcgcgcctggtcaatcgccagcaggcgctggaggcgcgg
gcgttgctggcggcccggcctgcggacgttcattgcctgactttgggcggcgagcacgac
aagcgcttcgatcgcctgctgctcgacggcctcggccagggcgccgaaggcccccagggt
taccgaggctacctgcgcagcatcggtcggttgcgcccgccaccaggcaccccaggcgac
gacccgcgttgggagcgctgggcggcggaggtactgcagagcttcgaagccttccagctg
ctttgcgccgtgcgcaggggcgcctggggcgtcgaaggcctgaacgaacgcgtggcccgg
gtgctgcacaatgccgggctgatcgatagccagcaaccctggtacgagggccgcccggta
ctggtcacccgcaatgactacggtctcggcctgatgaacggtgatatcggcattgccctg
cgggtgccggacgagcagggcgaggcgctgctgcgcgtggccttcccgcgcaacgatggc
agcggtggggtgcgcttcgtcttgcccagccggctcagcgaagtggaaacggtgttcgcc
atgaccgtgcataagtcccaaggctcggaattcagccataccgcgctggtgctgccggat
gccttgaacccggtgttgaccaaggagctggtgtacacaggcattacccgtgccaagcat
tgcttcagcctgatcgagccgcgcgccggggtgttcgaggaggcggtggggcgcaaggtc
aggcgtgtctcggggctgatgctggagcaagtctga
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