Pseudomonas maumuensis: KSS90_05925
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Entry
KSS90_05925 CDS
T07719
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
pmam
Pseudomonas maumuensis
Pathway
pmam03410
Base excision repair
pmam03430
Mismatch repair
pmam03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pmam00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
KSS90_05925 (recJ)
03430 Mismatch repair
KSS90_05925 (recJ)
03440 Homologous recombination
KSS90_05925 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmam03400
]
KSS90_05925 (recJ)
DNA repair and recombination proteins [BR:
pmam03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
KSS90_05925 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
KSS90_05925 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
KSS90_05925 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Motif
Other DBs
NCBI-ProteinID:
QXH57738
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All DBs
Position
1275576..1277285
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AA seq
569 aa
AA seq
DB search
MRIEPRPLPSPLPLLGNLPPLLTRLYAARGVASEVELDKSLARLLPYQQLKGIDAAVELL
VEALDQRQRILIVGDFDADGATASTVGVLGLRLLGAAHVDYLVPNRFEYGYGLTPEIVAV
ALERQPQLLITVDNGISSVDGVAAAKAAGLKVLVTDHHLPGEQLPAADAIVNPNQPGCAF
PSKSLAGVGVIFYVLMALRARLRSLGRYETQAQPNIGELLDLVALGSVADVVPLDANNRI
LVHQGLERIRAGRARPGLKAILEVARRDHKRITSTDLGFILGPRLNAAGRLDDMSLGIEC
LLCEDAALALDMAQQLDGLNQDRKSIEQGMQREALAQLKDLPVESMPYGLCLFDADWHQG
VIGILASRLKERYHRPTIAFADAGEGVLKGSARSVPGFHIRDALDAVAARHPSLISKFGG
HAMAAGLSLPAENFPAFAEAFDDEVRRQLREEDLTGRLLSDGTLAVEEFHLDLARALRNA
GPWGQHFPEPLFHGVFQLVEQRVVGERHLKVVLKSECGAVRLDGIAFGIDREVWPNPTVR
WVELAYKLDVNEFRGNESVQLMIAHMEAR
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgcgtatcgaaccacgtcccctgccgtcgcccctgcctttgctgggcaacctgccaccc
ttgctgacccgtctgtatgccgcccgtggcgtagcgtccgaggtcgagctggacaagagc
ctggcgcgtctgctgccttaccagcaactcaagggtatcgacgcggcggtggagctgctg
gtcgaggcgctcgatcagcgccagcgcattctcatcgtcggcgatttcgatgccgacggt
gccactgccagcacggtcggcgtgctgggcttgcgcttgctgggcgcggcccatgtcgac
tacctggtgcccaaccgcttcgagtatggctatggcctgaccccggagatcgtcgcggtc
gcgctcgagcgccagccgcaattgctgatcaccgtggacaacggtatctccagcgtcgat
ggcgtggccgcggccaaggccgccgggctcaaggtgctggtcaccgaccatcacctgccg
ggcgagcaactgccggccgccgacgccatcgtcaatcccaaccagcccggttgcgcgttc
ccgagcaagtcactggccggtgtcggcgtgatcttctacgtgctgatggccctgcgtgcg
cggttgcgcagtctggggcgctacgaaacgcaggcgcagccgaacatcggcgagttgctt
gacctggtggcgctgggcagcgtcgctgacgtggtgccgctggatgccaacaaccgcatc
ctggtgcatcaggggctggagcggatccgcgccggccgcgcccgcccggggctcaaggcc
atcctcgaagtggcgcggcgcgaccacaagcgcatcacctccactgaccttggtttcatc
ctcggccctcgactcaatgccgccgggcgcctggacgacatgagcctgggcatcgaatgc
ctgttgtgcgaagacgcggcgctggcgctggacatggcccagcagctggatggcctgaac
caggaccgcaagtccatcgagcagggcatgcagcgcgaggctctggcccagctcaaggat
ctgccggtcgagtccatgccttatggcttgtgcctgttcgacgccgactggcaccagggg
gtgatcggcatcctcgcttcgcgcctgaaagagcgttaccaccgcccgaccattgccttt
gccgatgcgggcgaaggggtgctgaagggctcggcgcgttcggtgccggggttccatatc
cgtgatgcgctggacgccgttgcggcgcggcatccgagcttgatcagcaagttcggtggg
catgccatggcggcagggctgtccttgccggccgagaatttccccgcgtttgccgaggcg
ttcgacgacgaggtacggcgccagctgcgtgaggaagacctgactgggcggttgttgtcg
gatggcacgttggcggtggaggagtttcacctggacctggcgcgggcgttgcgcaatgcc
gggccttgggggcagcactttcccgagccgttgttccacggggtgttccagctggtcgag
cagcgggtcgtcggggagcggcatctgaaagtggtgctcaagagcgagtgtggggcagtg
cggttggatgggattgcctttgggattgaccgggaggtctggccgaatcctactgtgcgg
tgggtggagttggcttacaagttggatgtgaatgagtttcgggggaatgagagtgtgcag
ttgatgattgcgcatatggaagcgcggtga
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