Pseudomonas maumuensis: KSS90_06105
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Entry
KSS90_06105 CDS
T07719
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
pmam
Pseudomonas maumuensis
Pathway
pmam03030
DNA replication
pmam03430
Mismatch repair
pmam03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pmam00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KSS90_06105 (dnaE)
03430 Mismatch repair
KSS90_06105 (dnaE)
03440 Homologous recombination
KSS90_06105 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pmam03032
]
KSS90_06105 (dnaE)
03400 DNA repair and recombination proteins [BR:
pmam03400
]
KSS90_06105 (dnaE)
Enzymes [BR:
pmam01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KSS90_06105 (dnaE)
DNA replication proteins [BR:
pmam03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KSS90_06105 (dnaE)
DNA repair and recombination proteins [BR:
pmam03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KSS90_06105 (dnaE)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
tRNA_anti_2
HROB
HHH_3
Motif
Other DBs
NCBI-ProteinID:
QXH57774
UniProt:
A0ABX8NP26
LinkDB
All DBs
Position
1318508..1322032
Genome browser
AA seq
1174 aa
AA seq
DB search
MSVSFVHLRVHSEFSLVDGLVRIKPLAKALAGMNMPAVAITDQSNMCSLVKFYKTAMGAG
IKPICGADLWLAGADPEAPLSRICFLAMNPKGYRNLTELISRGWTDGQRNGLVIIQRDWI
APASEGLIALSAGKEGDIGMALMANRQDEAQVLLADWMSMFPERFYVEVQRTNRAGDEEY
VHAAVALADKLGAPLVATNDVRFVKQSDFDAHETRVCIGEGWTLDDPRRPRGYSDQQYLK
SAEEMAELFSDLPDAIANTVEIAKRCNITVQLGKYFLPDFPTPNGMGIDDYLRHVSHEGL
EERLAVLWPKETTPNYEEKRQVYLDRLKFELDIIIQMGFPGYFLIVMDFIKWAKNNDVPV
GPGRGSGAGSLVAYVLKITDLDPLAYDLLFERFLNPERISMPDFDVDFCMDGRDRVIDYV
AEAYGRNAVSQIITFGTMAAKAVVRDVARVQGKSYGLADRLSKMIPFEVGMTLEKAYEQE
EILRDFLKSDEDGREIWDMALKLEGVTRGTGKHAGGVVIAPTKLTDFSPIACDEEGGGLV
TQFDKDDVEAAGLVKFDFLGLRTLTIIKWAMEIINREQAKKNLPDVNIDFIPLDDRKTYE
LLQKAETTAVFQLESRGMKELIKKLKPDCLEDLIALVALFRPGPLQSGMVDDFINRKHGR
AELAYPHSDYQYEGLKPVLAPTYGIILYQEQVMQIAQVMAGYTLGGADMLRRAMGKKKPE
EMAKQRGGFIEGCVANNIDADLAGNIFDLVEKFAGYGFNKSHSAAYGLVSYQTAWLKTHY
PAPFMAAVLSADMHNTDKVVVLVEEVRSMKLRLDAPDVNFSDFKFTVNNDGRIVYGLGAI
KGVGEGPVEAIVEARAQGGPFKDLFDFCERIDLKRVNKRTLDALIRSGALDRLGPHFHDE
LKAYQANIDINRATLLSALGEAVKAAEQAAHTADSGHVDLFGGMFDEADVDVYANHRKVR
ELTLKERLKGEKDTLGLYLTGHPIDEYETEIRRFARQRIVDLKPARDTQTIAGMIIALRV
MKNKKGDKMGFVTLDDRSGRIEASLFADAFMAAQALLQTDAMVVVEGEVSNDDFSGGLRL
RVKTVMTMEDARTKLAESLRLKVAHDALKGDRLNWLGELITRHRGGCPITLEYTGSDAKA
MLQFGDQWSIDPADGLIQALRDQFGRENVFLQYR
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtctccttcgttcaccttcgcgtgcactccgaattctccctggtcgacggcctg
gtgcggatcaagccgctggccaaggccctggccgggatgaacatgccggcggtggcgatc
accgaccagagcaacatgtgctcgctggtgaagttctacaagaccgccatgggcgccggc
atcaagccgatctgcggcgctgacctgtggttggccggggccgatcccgaggcgccgctg
tcgcgcatctgtttcctggccatgaaccccaagggttaccgcaatctcaccgagctgatc
tcgcgtggatggaccgatggccagcgcaatggcctggtgatcatccagcgcgactggatc
gccccggccagcgaagggctgattgccctctccgccggcaaggaaggcgacatcggcatg
gcgctgatggccaatcgtcaggacgaagcccaagtcctgctcgccgactggatgagcatg
ttccccgagcgcttctacgtcgaggtgcagcgcaccaaccgcgccggtgacgaagaatat
gtgcatgccgcagtggccctggccgacaagctcggcgcgccgctggtggcgaccaacgac
gtgcgtttcgtcaagcagtcggacttcgacgcccacgagacccgcgtatgcatcggcgag
ggctggaccctggacgacccgcgccgcccgcgtggctacagcgatcagcagtacctcaag
tccgccgaagagatggccgagctgttcagtgacctgccggacgccattgccaacaccgtg
gagatcgccaagcgctgcaacatcaccgtgcagctgggcaagtacttcctccccgacttc
ccgacgcccaacggcatgggcatcgacgactacctgcggcatgtctcccacgaaggcctg
gaggagcgcctggcggtgctctggccgaaggagaccacgcccaattacgaagagaagcgc
caggtctacctggaccgcctgaagttcgagctggacatcatcatccagatgggcttcccc
ggttacttcctgatcgttatggacttcatcaaatgggcgaagaacaacgacgtgccggtc
ggcccgggccggggttcgggtgccggctcgttggtggcctacgtgctgaagatcaccgac
ctcgacccgttggcctacgacctgctgttcgaacgtttcctcaaccctgaacgtatttcc
atgcccgacttcgacgtcgacttctgcatggatggccgcgaccgggtgatcgactacgtg
gccgaggcctacgggcgcaacgcggtgagccagatcatcaccttcggcaccatggccgcc
aaggcggtggtgcgtgacgtggcgcgggtgcagggcaagtcctatggcctggccgaccgc
ctgtcgaagatgatccccttcgaagtgggcatgaccctggagaaggcctacgagcaggaa
gagatcctgcgcgacttcctcaagagcgacgaggatggccgcgagatctgggatatggcc
ctcaagctcgaaggtgtcacccgcggtaccggcaagcacgccggtggcgtggtgatcgcg
ccgaccaagcttaccgacttctcgccgattgcctgcgatgaagagggcggcggcctggtg
acccagttcgacaaggacgacgtcgaggccgcgggcctggtgaagttcgacttcctcggc
ctgcggaccctgaccatcatcaagtgggcgatggagatcatcaaccgcgagcaggccaag
aagaacctgcccgacgtcaacatcgacttcattccgctggacgaccgcaagacctacgag
ctgttgcaaaaagccgagaccacggcggtgttccagcttgaatcgcgcggcatgaaggag
ctgatcaagaagctcaagcccgactgcctggaagacctgatcgcactggtggcgctgttc
cgccctggcccgctgcagtcgggcatggtggacgacttcatcaaccgcaagcacggtcgc
gccgagctcgcctacccacactccgactaccagtacgaaggcctcaagccagttctggcg
cccacctacggcatcatcctgtaccaggaacaggtgatgcagatcgcccaggtgatggcg
ggctacaccctcggcggcgccgacatgctgcgccgggccatgggtaagaaaaagcccgag
gaaatggccaagcagcggggcggtttcatcgaaggctgcgtggccaacaacatcgatgcg
gaccttgccggtaacatcttcgacctggtagagaaattcgccggctacggcttcaacaaa
tcccactccgccgcctacggcctggtgtcgtaccagaccgcctggctgaagacccactac
ccggcgccgttcatggctgcggtgctgtcggcggacatgcacaacaccgacaaggtggtg
gtgctggtcgaggaagtacgcagcatgaagctgcgcctcgacgcgccggacgtgaacttc
tccgacttcaagttcaccgtcaacaacgatggccgcatcgtttatggcctgggggcgatc
aagggtgtgggcgaaggcccggtggaggcgatcgtcgaggcgcgcgcacagggtggtccg
ttcaaggacttgttcgacttctgcgagcgcatcgacctcaagcgcgtcaacaagcgtacc
ctcgatgcgttgatccgcagtggcgcactggatcgtctcggcccgcacttccatgacgaa
ctcaaggcctaccaggccaacatcgacatcaaccgcgcgaccctgttgtcggcgctgggt
gaggccgtcaaggctgccgagcaggcggctcataccgccgacagtggccatgtcgacctg
ttcggcggcatgttcgacgaggcagatgtcgacgtctatgccaatcaccgcaaggtgcgc
gaactgacgctcaaggagcgcctgaaaggtgaaaaggacaccctcggcctgtacctcacc
gggcacccgatcgatgagtacgagaccgagatccgccgctttgcccgccagcgcattgtc
gacctgaagcccgcgcgggatacccagaccatcgccgggatgatcattgccctgcgcgtg
atgaagaacaagaagggtgacaagatgggcttcgtcacccttgacgaccgctccgggcgc
atcgaggcttcgttgttcgccgacgccttcatggccgcccaggccctgctgcagaccgac
gccatggtggtggtggaaggagaggtcagcaacgacgatttctccggtggcctgcgcctg
cgggtcaagaccgtgatgaccatggaggacgcgcgcaccaagctggccgagagcctgcgc
ctgaaggtcgcccacgacgcgctcaagggggaccgcctgaactggctgggcgagttgatc
acccgtcaccgtggtggctgcccgatcaccctggagtacaccggcagcgacgccaaggcg
atgctgcaattcggcgaccagtggtccatcgaccctgccgacggcctgattcaagccctg
cgtgaccagttcggacgtgagaacgtcttcctgcaataccgttga
DBGET
integrated database retrieval system
