Pseudomonas maumuensis: KSS90_06345
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Entry
KSS90_06345 CDS
T07719
Symbol
rapA
Name
(GenBank) RNA polymerase-associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
pmam
Pseudomonas maumuensis
Brite
KEGG Orthology (KO) [BR:
pmam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmam03021
]
KSS90_06345 (rapA)
Transcription machinery [BR:
pmam03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
KSS90_06345 (rapA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapA_C
Tudor_1_RapA
Tudor_RapA
Helicase_C
SNF2-rel_dom
ResIII
DEAD
Cas3-like_C_2
DUF6231
Motif
Other DBs
NCBI-ProteinID:
QXH57820
LinkDB
All DBs
Position
complement(1372097..1374943)
Genome browser
AA seq
948 aa
AA seq
DB search
MAQQYQPGQRWISDSEAELGLGTILAQDGRLLTVLYPATGDTRQYSLRNAPLTRVRFSPG
DLITHFEGWKLTVQEVEDIDGLMVYHGIDPQNQPRTLPETQLSNFIQFRLASDRLFAGQI
DPLSWFSLRYNTLQHTSKQMLSTLWGLGGVRAQPIAHQLHIAREVADRIAPRVLLADEVG
LGKTIEAGLVIHRQLLSGRASRVLILVPENLQHQWLVEMRRRFNLQVALFDAERFIESDA
SNPFEDAQLALVALEWLVEDEKAQDALFAAGWDLMVVDEAHHLVWHEEQASPEYALVEQL
AQVIPGVLLLTATPEQLGQDSHFARLRLLDPNRFHDLAAFRAESEHYRPVAEAVQELLDE
GRLSPKAHATIQGFLGAEGEALLAAVSDGDSQASARLIRELLDRHGTGRVLFRNTRAAIQ
GFPERQLHPYPLANPEAYADLPSGERAELYPEVAFQAQGEAGDDERWWRFDPRVDWLIDT
LKMLKRTKVLVICAHAETAMDLEDALRVRSGIPASVFHEGMSILERDRAAAYFADEEFGA
QVLVCSEIGSEGRNFQFAHHLVMFDLPAHPDLLEQRIGRLDRIGQKHTIQLHIPYLQDSP
QERLFQWYHEGLNAFLNTCPTGNALQHQFGPRLLQQLAGGDDKGWTQLVGEARAERERLE
AELHTGRDRLLELNSGGAGEGQALVEAILEQDDQFALPIYMETLFDAFGIDSEDHSENAL
ILKPSEKMLDASFPLGDDEGVTITYDRGQALSREDMQFLTWEHPMVQGGMDLVLSGSMGN
TAVALIKNKALKPGTVLLELLYVSEVVAPRSLQLGRYLPPAALRCLLDTNGNDLGPRVAF
ETLNDQLESVPKASANKFIQAQRDVLAKRIAAGEAKVLPTHDERVAQARQRLTAEADEEL
ARLTALKAVNPSVRDSEIDALRKQREEGLAALEKAALRLEAIRVLVAG
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagcagtatcaaccggggcaacgctggatcagcgacagcgaggccgagctcggt
cttgggaccatcctggcgcaggatggccgcctgttgaccgtgctctacccggccacgggc
gacacccgccagtactcgctacgcaatgcgccgctgacccgcgtgcgtttctcgccaggc
gacctgatcacccatttcgaaggctggaagctgaccgtgcaggaggtcgaggacatcgac
ggcctgatggtctaccacggcatcgacccgcagaaccaaccgcgcacactgcccgagacg
cagctgtccaacttcatccagttccgcctggccagcgaccgcctgttcgccgggcagatc
gacccgctgtcgtggttctcgctgcgctacaacaccctgcagcacaccagcaagcagatg
ctctccacgctatggggcctgggtggcgtgcgtgcccagcccatcgcccaccagctgcac
atcgcccgtgaagtggccgaccgcatcgctccccgcgtactgctggccgacgaagtgggc
ctgggcaagaccatcgaggccggcctggtcatccaccgccagctgctgtccggtcgcgcc
agccgcgtgctgatcctggtgccggaaaacctccagcaccagtggctagtggaaatgcgc
cggcgcttcaacctgcaggttgcgctgttcgacgccgagcgcttcatcgaaagcgacgcc
agcaacccgttcgaggatgcccagctggcgctggtcgcgctggagtggctggtcgaggac
gaaaaggcccaggacgcgctgttcgccgccggctgggacctgatggtggtcgacgaggcc
catcacctggtctggcacgaagaacaagccagccccgagtacgcgctggtcgagcaactg
gcccaagtgatcccgggcgtgctgctgcttaccgccacgcctgaacagcttggccaggac
agccacttcgcccgcctgcgcctgctcgaccccaaccgcttccacgacctggccgccttc
cgcgccgaaagcgagcactatcgccctgtggccgaagcggtacaggagctgctcgacgaa
ggccgtctgtcgccgaaagcccacgccaccatccagggcttcctcggcgccgaaggcgaa
gcactgctggccgcggtcagcgatggcgacagccaggccagcgcgcgcctgatccgcgaa
ctgctcgaccgccacggtaccggccgcgtgctgttccgcaacacccgtgcggcgatccag
ggcttccccgagcgccaactgcacccctacccgctggccaaccccgaagcctacgccgac
ctgccttcgggcgagcgcgccgagctgtacccggaagtggccttccaggcccagggcgaa
gccggcgacgacgagcgctggtggcgtttcgaccctcgggtcgactggttgatcgacacc
ctgaagatgctcaagcgcaccaaggtcctggtgatctgcgcccacgccgagaccgccatg
gacctggaagacgccctgcgcgtgcgctccggcatcccggcctcggtgttccatgaaggc
atgagcatcctcgagcgtgaccgcgccgccgcctacttcgccgacgaagagttcggcgcc
caggtgctggtgtgttccgagatcggcagcgaaggccgcaacttccagttcgcccatcac
ctggtgatgttcgacctgccggcccacccggacctgctcgagcaacgcatcggccgcctc
gaccggatcggccagaagcacacgatccaactgcacatcccgtacctgcaggacagcccg
caggagcgcctgttccagtggtaccacgaaggcctcaacgccttcctcaacacctgcccg
accggcaacgccctgcaacatcagttcggcccgcgcctgctgcaacagctggccggtggc
gacgacaaaggctggacccagctggtcggcgaggcccgtgccgaacgcgagcgcctggag
gccgagctgcacaccggtcgcgaccgcctgctggagctcaactccggtggtgctggcgaa
ggccaggcgctggtcgaggcgatcctcgagcaagacgaccagttcgccctgccgatctac
atggaaaccctgttcgacgccttcggtatcgacagcgaggaccactcggaaaacgccctg
atcctcaagccgagcgagaagatgctcgacgccagcttcccgctgggtgacgacgaaggc
gtgaccatcacctacgaccgtggccaggcgctgtcgcgcgaggacatgcagttcctcacc
tgggagcacccgatggtccagggcggcatggacctggtgctgtccggctcgatgggcaac
accgccgtggcgctgatcaagaacaaggcgctcaagcccggcaccgtgctgctcgaactg
ctctatgtcagcgaagtggtggcaccgcgcagcctgcagctggggcgctacctgccgccg
gccgcgctgcgctgcctgctcgataccaacggcaacgacctgggcccgcgggtggccttc
gaaactctcaacgaccagctcgaaagcgtgcccaaggccagcgccaacaagttcatccag
gcccagcgcgacgtgctggccaagcgcatcgccgcgggcgaggccaaggtcctgccaacc
cacgacgagcgcgtggcccaggcccggcagcgcctgaccgccgaagccgacgaggagctg
gcgcgcctgactgcgttgaaggccgtcaacccgagcgtgcgcgacagcgagatcgacgcc
ctgcgcaagcagcgcgaagagggcctggcggcgctggagaaagcggcactgcgcctcgag
gcaatccgggtgctcgtcgccggttga
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integrated database retrieval system
