Pseudomonas maumuensis: KSS90_15390
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Entry
KSS90_15390 CDS
T07719
Name
(GenBank) ATP-dependent DNA helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
pmam
Pseudomonas maumuensis
Pathway
pmam03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pmam00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
KSS90_15390
09124 Replication and repair
03420 Nucleotide excision repair
KSS90_15390
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmam03021
]
KSS90_15390
03036 Chromosome and associated proteins [BR:
pmam03036
]
KSS90_15390
03400 DNA repair and recombination proteins [BR:
pmam03400
]
KSS90_15390
Enzymes [BR:
pmam01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
KSS90_15390
Transcription machinery [BR:
pmam03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
KSS90_15390
Chromosome and associated proteins [BR:
pmam03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
KSS90_15390
DNA repair and recombination proteins [BR:
pmam03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
KSS90_15390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
HBB
Helicase_C
Motif
Other DBs
NCBI-ProteinID:
QXH54747
LinkDB
All DBs
Position
complement(3469339..3471594)
Genome browser
AA seq
751 aa
AA seq
DB search
MSYTVAVRALCEFSAKVGDLDLRFTPSPSAQEGIAGHRRVVAKRGAGYESEVVLEGEYQG
LRVRGRADGYDPARNRLEEIKTHRGDLARQPDNHRQLHWAQAKVYAWLLCQARQLPAIDV
ALVYLDVDSDGQTVISEHYDADDLRRFFEAQCQRFLAWAQAQEQRLTERDRGLQALTFPY
PAFRQGQRQLAETLYKAVSTGRCLMAQASTGIGKTLGTLFPLLKAVVPQQLDKLYFLTAK
TPGRALALDALRQITQASPQPALRSLELIARDKACEYPQNACHGESCPLARGFYDRLPAA
REAAAQVPLLDRASLREVALAHQVCPYYLGQEMARWVDLLVADYNYYFDAHALLFGLAQA
NQWRTAVLVDEAHNLVERGRQMYSASLDQGQLLALRQGKPAGLGSALDRLNRQWNALYKA
QVAPYQASEQLPDAFLRALQQCIGLIQERMNQAPAEVEPKVLEFYFQALQFSRIAELFDE
HFLFDISPRNGPRGRRLATLCLRNVVPARLLGPRMSAARSVTLFSATLNPRHFYSDLLGM
PADTAWLEVAAPFRAEQLQVRIVSEVSTRYQQRQASLAPIVELIAAQFAGQPGNYLAFFS
SFEYLEQVARLLAERYPALPIWCQSPGMDEASREAFLARFVEHGQGVGFAVLGGAFGEGV
DLPGTRLIGAFVATLGLPQVNPVNEQFKQRLGRQFGAGFDYAYLYPGVRKVIQAAGRVIR
GDHDRGVLVLIDERFAEPRVRQMFPGWWQLA
NT seq
2256 nt
NT seq
+upstream
nt +downstream
nt
atgagctacaccgtggccgtgcgcgccctgtgcgaattcagcgccaaggtcggcgacctc
gacctgcgcttcacgccgtcgcccagtgcccaggaaggtattgccgggcaccgccgggtg
gtggccaagcgcggcgccggctatgagtcggaggtggtgctggagggtgaataccaaggc
ctgagggtgcgcggccgtgccgatggctacgacccggcacgcaaccggctggaagagatc
aagacccaccgcggcgacctcgcccgccagcctgacaatcaccgccaactgcactgggcc
caggccaaggtctacgcctggctgctgtgccaggcgcggcaattgccggcgatcgacgtg
gcgctggtctatctggacgtcgacagcgacggccagaccgtgatcagtgagcattacgac
gccgacgacctcaggcgctttttcgaggcccaatgccaacgcttcctggcctgggcgcag
gcgcaggagcaacgcctgaccgaacgtgaccgggggctgcaggccctgacctttccttac
cctgcgttccgtcaaggccagcggcaactggccgagaccctgtacaaggcggtgagcacc
ggccgttgcctgatggcccaggccagcaccggcatcggcaagaccctcggcacgctgttt
ccgctgctcaaggccgtggtgccgcagcagttggacaaactctacttcctcacggccaag
accccggggcgtgccctggccctcgatgcgctgcgccagatcacccaggcgtcgccgcaa
ccggccttgcgcagcctcgagctgatcgcccgcgacaaggcctgcgagtatccgcaaaac
gcctgccatggcgagtcctgccccttggcgcgaggtttctacgaccgtttgcccgccgcc
cgtgaggccgctgcgcaggtgccgctgctcgaccgtgccagcttgcgcgaggtagcgctg
gcgcaccaggtctgcccctattacctggggcaggagatggcgcgctgggtcgacctgctg
gtggccgactacaactactacttcgacgcccatgcgctgctgttcggcctggcccaggcc
aaccagtggcgcacggcggtgctggtggacgaggcgcacaacctggtcgagcgcgggcgg
cagatgtacagcgccagcctcgaccagggccagttgctggcgctgcgccagggcaagccg
gccgggctcggcagcgccctcgaccggctgaatcgacaatggaatgcgttgtacaaggcg
caggtcgcaccgtaccaggccagcgagcagttgcccgatgctttcctgcgtgccctgcag
caatgcatcgggctgatccaggaacgcatgaaccaggcgcccgccgaggtcgagcccaag
gtgctggagttctacttccaggccttgcagttcagccgtatcgccgagttgttcgacgag
cacttcctgttcgatatcagcccgcgcaacggcccccgtgggcggcgcctggccacgttg
tgcctgcgcaacgtggtgcctgcccggctgctgggcccgcgcatgagcgcggcgcgcagc
gtcacgctgttttccgccacgctcaatcctcggcacttctacagcgacctgctgggcatg
ccggccgatactgcctggctggaggtcgccgcgccgtttcgcgccgagcagttgcaggtg
cgcatcgtcagcgaggtatccacccgctaccagcagcgccaggcctcactggcgccgatc
gtcgagctgatcgccgcccagttcgccggccagccgggcaactacctggccttcttcagc
agcttcgagtacctcgagcaggtggcgcggctgctggccgaacgctatccggcgctaccc
atctggtgccagtcccccgggatggacgaggctagccgcgaggccttccttgcgcgcttc
gtggagcacgggcagggggtgggcttcgccgtgctcggtggcgccttcggcgagggcgtc
gacctgccgggcacccgcctgatcggcgccttcgtcgccaccctcggcctgccccaggtc
aatccggtcaacgagcagttcaagcagcgcctgggccggcagttcggtgccggtttcgac
tatgcgtatctctatccgggggtgcgcaaggtgatccaggccgccggccgggtgatccgc
ggcgaccacgaccgcggcgtgctggtgctgatcgacgagcgctttgccgaaccgcgggtg
cggcagatgttccccggctggtggcagcttgcgtga
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integrated database retrieval system
