KEGG   Pseudomonas maumuensis: KSS90_20240
Entry
KSS90_20240       CDS       T07719                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
pmam  Pseudomonas maumuensis
Brite
KEGG Orthology (KO) [BR:pmam00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pmam03400]
    KSS90_20240
Enzymes [BR:pmam01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     KSS90_20240
    5.6.2.6  RNA 3'-5' helicase
     KSS90_20240
DNA repair and recombination proteins [BR:pmam03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    KSS90_20240
SSDB
Motif
Pfam: DEAD_assoc DEAD WHD_4th_Lhr WHD_Lhr WHD_3rd_Lhr Helicase_C ResIII Cas3-like_C_2 WHD_2nd_Lhr WHD_DprA AAA_25 HTH_9
Other DBs
NCBI-ProteinID: QXH55640
UniProt: A0ABX8NGZ0
LinkDB
Position
4515867..4520168
AA seq 1433 aa
MNLPAQLHPVLDLFHPAVATWFRQRFATVTEAQARAWPLIHAGQSMLLAAPTGSGKTLSA
FLAVLDELFRQGLQQGGELPAQTQVVYVSPLKALSNDIRLNLDAPLEGIGQQFAQLGLEA
PRITTAVRTGDTPQKERAAMRKLAPHILVTTPESLYVLMGSASGRQGLASVHTVIVDEIH
ALAGNKRGCHLALTLERLQALAGRPLRRIGLSATQRPVERVAQFLVGHERPCAIVDIGHV
RQRDLALEVPPVPLGAVMATDVWSLVYERLAVLAREHRTTLVFVNTRRLAERLTRHLGER
LGNDAVAAHHGSLAKEHRLAAEQRLKAGELQVLVATASLELGIDIGDVDLVCQIASPGSI
AAFLQRVGRSGHQVEGIPKGRLFPTSRDDLIECVALLDCVRQGELDALHIPHAPLDVLAQ
QIVAEVSNQPWSERALFDLLRQATPYAELDEGHYQALLRMLAEGYNGRQGVRGAYLHRDA
VNGTLRGRRGSQLTALTSGGTIPETADYAVLLEPQALNIGSVNEDFAVESIAGDIFQLGN
ASYRILRVEPGRVRVEDAHGLPPTIPFWLGEAPGRSDELSAAVARLQQRLDQQLQAGDTQ
QVQAWLQATYELDEACASQLLDYLGRTWQVLGALPSQQTLVMERFFDESGGTQLIIHSPF
GSRINRAWGLALRKRFCRTFNFELQAAASEDAIVLSLSTSHSFDLDEVWRYLNSRSAEAI
LIQALLDAPLFGVRWRWNAAVAMALPRYVGGRKVAPQIQRMKSEDLVASVFPDQLACLEN
IVGERQIPDHPLVEQTLDDCLHEAMDSEGWLELLRRMERGEVALLSRDLPAPSPLASAIL
NARPYTFLDDAPLEERRTQAVHNRRWSDVHSADDLGALDADAIAAVQAEAWPQARNPDEM
HEALMSLGAMTEHEVDTNGAWRDLLQQLAKAGRACRLGTGEHSLWLARERQQALLTLYPD
ARLEPDMPLLPGYDAPVDSDTALTELLRCRLDGFGPMTLEQIATPLALKAGDCEQSLARL
EGQGLVMRGHFSPGQTRLQWCERHLLARIHRYTVKRLRQEIEPVSLQDYLRFLFDWQHVS
GETRLRGSQALPEVLAQLQGFPAAAGAWEGDLLPARIKDYSPHWLDEACRSGQWSWSRLA
ATLSASTLASTPLVLLPREHLGLWRSLTPTPDLQQLGARAQRVLQTLQEQGALFFDELAH
EAHLLPSELESALQELVGSGLASADGFSGLRSLISPAARRKPRTSRRGHPALSSSMVHAG
RWALLRRSTVTVDSDQRLEHVARSLLRRYGVVCWRLLERESDVLPPWRTLLRCYQRLEAR
GEIRGGRFIAGLAGEQFALPEAVGLLRQVRNRTPGGELVMVSGCDPLNLVGTLLPGTKVP
AVAGNRLLYRDGVPVASRVAGKYLFAVEASASEQDRWRQLLLRDTAAQVQPLV
NT seq 4302 nt   +upstreamnt  +downstreamnt
atgaatctgcccgcccagctccacccggtgctcgacctgttccaccctgctgtcgccacc
tggttccgccagcgctttgccacggtcaccgaggcccaggcccgcgcctggccgctgatc
catgccggccagtcgatgctgctggccgcgccgaccggctcgggtaagaccctcagtgcc
tttctcgcggtgctcgacgaattgttccgccaagggttgcaacaaggcggcgagctgccc
gcgcaaacccaggtggtctatgtgtcgccgctcaaggcgctgtccaatgacattcgcctc
aacctcgacgcgccgctcgagggtatcggccagcagttcgcacaactcggcctcgaggcc
ccacgcatcaccaccgccgtgcgtaccggcgacacgccccagaaggagcgcgccgccatg
cgcaagctggcgccgcacatcctggtgaccacgccggaatcactgtatgtgctgatgggc
tcggcctccggtcgccaggggctggccagtgtgcacacggtgatcgtcgacgagatccac
gccttggccggcaacaaacgtggctgccacctggcgctgaccctagaacgtttgcaggcc
ctcgctggccgacctttgagacgtattggcctgtctgcgacccagcggccggtggagcgc
gtggcgcagtttctggttggccacgaacggccctgcgccatcgtcgatatcggccatgtc
cgccaacgcgacctggctctggaagtaccgcctgtgccactgggcgcggtcatggccacc
gatgtctggagcctggtctacgagcgcctcgcggtgctcgcccgcgagcatcgcaccacg
ctggtgttcgtcaacacccggcgcctggccgagcgcctgacgcgtcacctgggcgagcgc
ctgggcaacgacgcggtcgccgcccatcacggcagcctggccaaggagcatcgcctggcc
gccgagcagcggctcaaagccggcgaactgcaggtgctggtggccaccgcgtcgctggag
ctgggcatcgatatcggcgatgtcgacctggtctgccagatcgcctcgccgggctcgatc
gccgcgttcctgcagcgggtcggacgctccggccaccaggtcgagggcatccccaagggc
cgcctgttccccacctcgcgggacgacctgatcgaatgcgtggcgttgctcgactgcgtg
cgccagggcgagctggacgccctgcacatccctcacgcaccgcttgacgtgctggctcag
cagatcgtcgccgaggtcagcaaccagccgtggtccgaacgcgcgctgttcgacctgctg
cgccaggccacgccttatgccgagctggacgagggccattaccaggccttgctgcgcatg
ctcgccgagggctacaacggccgccagggcgtgcgcggcgcctacctgcatcgcgatgcg
gtgaacggcaccctgcgtgggcgtcgcggcagccagctgaccgcgctgaccagcggcggc
accattcccgagacggccgactatgcggtgctgctcgagccccaagcgttgaacatcggc
agcgtcaacgaggatttcgccgtcgagagcattgccggcgatatcttccaactgggcaac
gcgtcgtaccgcatcctgcgcgtcgagcctgggcgggtgcgggtcgaggacgcccacggc
ctgccaccgaccattccgttctggctcggcgaagcgcctgggcgcagtgacgaactgtcc
gccgcagtggctcggctgcagcaacgtctcgaccagcaattgcaggccggcgacactcaa
caggtgcaggcctggctccaggcgacttatgaactggacgaagcctgcgccagccaactg
ctcgactaccttggccgtacctggcaggtactcggcgccctgccctcgcagcagacgctg
gtgatggagcgctttttcgacgagtccggcggcacccagctgatcatccactcgcccttt
ggcagccgtatcaaccgcgcctggggcctggccctgcgcaagcgcttctgccgcaccttc
aacttcgaactgcaggcggcggccagcgaggacgccatcgtgctgtccctgtccaccagc
cacagtttcgacctggacgaggtgtggcgctacctgaacagccgcagtgccgaagcgatc
ctgatccaggcgttgctcgacgccccgctgttcggcgtgcgctggcgctggaatgccgcg
gtggccatggccctgccgcgttacgtgggcggtcgcaaggtggcgccgcagatccagcgc
atgaagagcgaggacctggtggcctcggtgttccccgaccagcttgcctgcctggagaac
atcgtcggcgagcggcagatccccgatcatccattggtcgagcagaccctcgacgactgc
ctgcacgaggccatggacagcgagggctggctggagctgctgcggcgcatggagcgcggt
gaagtagccttgctcagtcgcgatctgccggccccctcgccgctggcctcggcgatactc
aatgcccgcccctacaccttcctcgacgacgcgccgctggaagagcgccgcacccaagcc
gtacacaaccgacgctggagcgacgtgcacagcgccgacgacctgggcgcgctggacgcc
gacgccattgccgcggtgcaagccgaagcctggccccaagctcgtaaccccgacgaaatg
catgaggcgctgatgagcctgggggccatgaccgagcacgaagtagataccaatggcgcc
tggcgcgacctgttgcagcaactggccaaggcgggccgggcctgtcgcctgggtacgggc
gaacacagtctgtggctggcccgcgagcgccagcaggcgctgctgacgctgtacccggat
gctcgcctggaaccggacatgccgctattgccgggctatgacgccccggtcgacagcgat
accgccctcaccgaactgctgcgctgccgcctcgatggctttggcccgatgacgctggag
cagatcgcgacacctctggcgctgaaggccggggactgcgaacagtccctggcccgcctg
gagggccagggcctggtgatgcgcggccatttcagccccggccagacgcgcctgcaatgg
tgcgagcggcacctgctggcgcgcattcatcgctacacggtcaaacgcctgcgccaggag
atcgaaccggtcagtctgcaggactacctgcgcttcctgttcgactggcagcacgtgagc
ggcgaaacccgtctgcgtgggtcgcaggcgctgcccgaggtgctcgcccagctgcaaggt
tttcccgccgccgccggggcctgggagggcgacctgctgccagcgcgaatcaaggactac
agcccccactggctcgatgaggcctgccgcagcggccagtggtcctggagtcggctagcg
gcgacgctatcggccagcaccctggccagcacgcccctggtgttgctgccgcgcgagcac
ctgggactgtggcgcagcctcacccccacgcccgacctccaacagctgggggcccgcgcg
cagcgagtcttgcaaaccttgcaggagcaaggcgctttgttcttcgacgaactggcccat
gaagcccacctgttgcccagcgaactggaatcggcgctgcaggaactggtgggctcgggc
ctggccagcgccgacggtttcagcggcctgcgcagcctcatcagccccgcggccaggcgc
aagccgcgcaccagccggcgcgggcacccagcgctgtcgagcagcatggtccatgccggg
cgctgggcgttgctgcgccgctcgaccgtcacggtcgacagcgaccagcgcctggaacat
gtggcccgcagcctgctgcgccgctatggcgtggtgtgctggcgcttgctggagcgcgag
agcgatgtgctgcccccgtggcgcacactgttgcgctgctatcagcgtctcgaggcgcga
ggcgagatccgcggggggcgcttcattgccgggctggcgggcgagcagttcgccctgccc
gaagcggtagggttgctgcgccaggtgcgcaaccgcacgccgggcggggaactagtgatg
gtcagcggctgcgaccctctgaacctggtcggcacactgctgccgggaacgaaagtgccg
gcagtggcgggcaatcggctgctgtatcgcgacggggtgccagtcgccagtcgcgtggca
gggaagtacctgtttgcggtagaagcatcggccagcgaacaggaccgttggcgccagctt
ctgttgcgcgatacagcggcgcaggttcagcccttggtctga

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