Pseudomonas mandelii: OU5_0164
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Entry
OU5_0164 CDS
T03626
Name
(GenBank) DNA topoisomerase, type I, putative
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
pman
Pseudomonas mandelii
Brite
KEGG Orthology (KO) [BR:
pman00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pman03032
]
OU5_0164
03400 DNA repair and recombination proteins [BR:
pman03400
]
OU5_0164
Enzymes [BR:
pman01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
OU5_0164
DNA replication proteins [BR:
pman03032
]
Prokaryotic type
DNA Topoisomerases
OU5_0164
DNA repair and recombination proteins [BR:
pman03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
OU5_0164
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
AHZ67243
UniProt:
A0A024E4M1
LinkDB
All DBs
Position
complement(209729..210769)
Genome browser
AA seq
346 aa
AA seq
DB search
MPDTALPDVLPPDLHYVDDTQPGITRKRLRGKFCYFDPAGQRITDPDEIKRLNALAVPPA
YTNVWICADPRGHLQATGRDARGRKQYRYHARWREVRDADKYSRLRDFGLALPKLRKQLE
TLLDAPGFSRDKVMATVITLLDATLIRVGNTQYARENRSYGLTTLRSRHVEVNGSAILFQ
FRGKSGVEHQITVKDRRLARIIKRCLEIPGQDLFQYLDENGERHTVSSSDVNAYLQTLTG
ADFTAKDYRTWAGSVLALSVLRELQWEPESDAKRHVVEMVKNVARQLGNTPAVCRKCYIH
PAVLEGFMLGALAQLPRPRLRKGLRAEEVGLAMYLEKMIAEAESTK
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgcccgataccgcgctgcccgatgtgctgccacccgacctgcactacgtcgacgacacg
cagcctggaatcacccgcaaacgcttgcgtggcaaattctgctacttcgatcctgcgggc
cagcgcattaccgatcccgacgaaatcaagcgcctcaacgcccttgccgtgccgccggcc
tataccaatgtgtggatctgcgccgacccacgtggtcatttgcaagccaccggccgtgac
gctcgcggtcgcaagcaataccgttatcacgcgcgttggcgcgaagtgcgcgatgccgat
aaatactcacgcctgcgggactttggcctggcactgccgaagctgcgcaaacagcttgaa
acgctgctggacgctccgggtttcagccgagataaagtcatggccaccgtgattaccttg
ctcgatgcgacgctgatccgggtcggcaacacgcaatacgcccgcgaaaatcgctcctat
ggcctgaccaccctgcgaagccgtcacgtcgaggtcaacggcagcgcgatcctgttccag
tttcgcggcaagagtggtgtcgaacaccagatcaccgtgaaagaccgacgcctcgcgcga
attatcaagcgctgcctggagattcccggacaagaccttttccaatacctggacgaaaat
ggcgagcgacacaccgttagctcctcagatgtcaatgcttacctgcaaaccctcaccggc
gccgacttcacggccaaggattatcggacatgggctgggagcgtcctggcgttgtcggtg
ctgcgtgagttgcagtgggagcctgagtcggacgcgaaacggcatgtggtcgagatggtc
aagaacgttgctaggcaactcggtaacaccccggccgtgtgccgcaagtgctacatccac
ccggcggtgctcgaaggttttatgctcggcgccttggcccaactgccgcggccgagactg
cgtaaaggtctcagggcagaagaagtcgggctcgccatgtatctggagaaaatgatcgct
gaggcagaatcgacaaaatga
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