Pseudomonas mandelii: OU5_2270
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Entry
OU5_2270 CDS
T03626
Symbol
truD
Name
(GenBank) tRNA pseudouridine synthase D
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
pman
Pseudomonas mandelii
Brite
KEGG Orthology (KO) [BR:
pman00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pman03016
]
OU5_2270 (truD)
Enzymes [BR:
pman01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
OU5_2270 (truD)
Transfer RNA biogenesis [BR:
pman03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
OU5_2270 (truD)
Prokaryotic type
OU5_2270 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
AHZ69349
UniProt:
A0A024E8V3
LinkDB
All DBs
Position
complement(2545555..2546613)
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AA seq
352 aa
AA seq
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MNEAQLLGPRAYGDALGTAVLKATAEDFQVDEVLDIPLSGDGEHLWIWVEKRGLNTEEAA
RRIAKAAGVPLRTVSYAGLKDRQALTRQWFSVQLPGKADPDLSAAENDTLKILKTGRHKR
KLQRGAHSANGFTLRLTQFAGDKAAIEERLQLIAKQGIPNYFGAQRFGFDGGNVVDARAW
AARKALPEQRNVRSRLLSTARSFLFNQVLAARVADGTWQQAQVGDLLAFTDSRSFFPAGE
AECNDPRLAILDLHPTGPQWGEGDSPATGAVHVLEQAIAAREADLRDWLINAGMNHERRI
LRLPIGGLTWHYPEPDILQLEFVLPAGCFATVLVRELVDLVPVGQTDSPCVF
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaagcgcaattgctcggcccgcgagcctatggcgacgccctcggtacggcggtt
ctgaaagccaccgcagaagattttcaggtcgatgaagtgctcgatatccccctcagtggc
gatggcgaacacttgtggatctgggtggaaaagcgcggtctcaataccgaagaagcagca
cggcgcattgccaaggcggcgggtgtgccattgcgcaccgtcagctatgcaggcctcaag
gatcgtcaggcgctgactcgccagtggttcagcgtgcagctgccgggcaaggccgatcct
gatttgtcggcggccgaaaacgacacgctgaaaatcctcaagaccggtcggcacaagcgc
aagctgcagcgcggtgcccattcggcgaatggcttcaccttgcgcctgacgcaattcgct
ggcgacaaagctgcgattgaagagcggctgcagctgatcgccaagcaaggtattcccaat
tatttcggtgcccagcgtttcggctttgatggcggtaacgtggtcgatgcccgtgcctgg
gccgcgcgcaaggcgttgccggagcagcgcaatgtccgttcgcgtctgctctccactgcc
cgcagcttcctgttcaaccaggtattggcggcgcgtgtggccgatggcacctggcagcaa
gcgcaggtcggcgatctgctggccttcaccgacagccgcagtttttttccggcaggtgaa
gccgagtgcaacgacccgcgtctggcaattctcgacctgcacccgaccggaccccagtgg
ggcgaaggtgactcgccggcgaccggcgctgtccatgtactggagcaggcaatcgccgct
cgcgaagcggatctgcgcgattggttgattaacgccggaatgaaccacgaacgtcgcatc
ctgcggctgcccattggtgggttgacgtggcattatccggagcctgacattctgcaactg
gaattcgtcctcccggccggatgctttgccaccgtattggtgcgcgagcttgttgatctg
gtgccggtggggcagacggacagcccatgcgtattctga
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