Pseudomonas mandelii: OU5_2630
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Entry
OU5_2630 CDS
T03626
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pman
Pseudomonas mandelii
Brite
KEGG Orthology (KO) [BR:
pman00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pman03016
]
OU5_2630 (truB)
Enzymes [BR:
pman01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
OU5_2630 (truB)
Transfer RNA biogenesis [BR:
pman03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
OU5_2630 (truB)
Prokaryotic type
OU5_2630 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
PUA_3
Motif
Other DBs
NCBI-ProteinID:
AHZ69709
UniProt:
A0A024E9W9
LinkDB
All DBs
Position
complement(2941438..2942355)
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AA seq
305 aa
AA seq
DB search
MAQVKRIRRNVSGIILLDKPLGFTSNAALQKVRWLLNAEKAGHTGSLDPLATGVLPLCFG
EATKFSQYLLDSDKGYETLAQLGKTTTTADAEGEVLQERPVTVGRADVEAVLPNFRGQIS
QIPPMYSALKRDGQPLYKLARAGEVVEREPRSVTIARLELLAFEGDTARLAVDCSKGTYI
RTLVEDIGEQLGCGAYVAELRRTQAGPFTLAQTVTLEELEAVHAEGGNEAVDRFLMPSDS
GLLDWPLLQFSEHSSFYWLNGQPVRAPDAPKFGMVRVQDHNGRFIGIGEVSEDGRIAPRR
LIRSE
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
gtggctcaggtcaaacgtatccgtcgtaacgtcagcggtatcattctgctcgacaagcca
ttggggttcacctccaacgccgcgttgcagaaggttcgctggctgctgaacgccgagaaa
gccggtcacaccggcagtctcgatccgctggccaccggcgtgttgccgttgtgcttcggt
gaggccaccaagttctcgcagtacctgctcgattccgacaagggttacgaaaccctggcg
caactgggcaagaccaccaccacggccgatgccgagggtgaagttttgcaggagcgtccg
gtgaccgttggtcgcgcagatgtcgaagctgttctgccgaattttcgcgggcaaatcagt
cagataccgccgatgtactcggcgctcaagcgtgatggccagccgctgtacaagctggcc
cgtgcaggcgaagtagtggagcgtgaaccgcgttctgttactattgcgcgcttggaattg
ctggcctttgaaggtgatactgcgcggcttgcggtggattgcagcaaaggcacctatatc
cgcaccctggtggaggatatcggtgagcaactcggttgtggcgcttacgtggctgaattg
cgacgtacccaggccgggcctttcacgctggcgcagacggtcacgcttgaagagttggaa
gcggtacatgccgaaggcggcaacgaagcggtcgaccgcttcctgatgccatcggacagc
ggccttctggattggccactgttgcagttctcggagcacagttcgttctactggcttaac
ggccaaccggtacgagccccggatgcaccgaagttcggcatggtacgggtacaggatcac
aacggtcgcttcatcggtatcggtgaagtgagcgaagacgggcgcatcgcgccacgtcga
ctgattcggtcagaatga
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