Pseudomonas mandelii: OU5_3063
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Entry
OU5_3063 CDS
T03626
Name
(GenBank) primosome assembly protein PriA
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
pman
Pseudomonas mandelii
Pathway
pman03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pman00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
OU5_3063
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pman03400
]
OU5_3063
Enzymes [BR:
pman01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
OU5_3063
DNA repair and recombination proteins [BR:
pman03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
OU5_3063
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
PriA_C
ResIII
Zn_ribbon_PriA
Helicase_C
WHD_PriA
AAA_30
HypA
Zn_ribbon_6
AAA_19
iSirtuin
RUBY_RBDX
TrwB_AAD_bind
AAA_25
PIF1
nSTAND3
Zeta_toxin
AAA_16
Motif
Other DBs
NCBI-ProteinID:
AHZ70142
LinkDB
All DBs
Position
3477206..3479425
Genome browser
AA seq
739 aa
AA seq
DB search
MPDAILRLALPSPLRRLFDYRAPAGILRAQLQPGMRLRVPFGRREMIGILVEVTDTSEVP
VEKLKPALALLDATPPLPPALFKLCLWTSQYYQHSLGDTLSWALPVLLRQGELAEARQER
FWSAAPGASLDDPRIARAPRQREALATLAQHPHGVAHQLLSKLMLSKDSLDLLLAKDLVQ
VEIRKHAPGARHEHWLAQPELPLNPEQRAAYEAIRAGFDSYHAFLLAGVTGSGKTEVYLQ
LIRETLEAGKQALVLIPEINLGPQTLARFEQRFNARIALIHSAVNDRERLEAWLAARDGD
ADIIIGTRSALFTPMKNPGLIIIDEEHDGSYKQQEGLRYHARDLALVRARQENIPIVLGS
ATPSLESLHNAYTGRYGLLRLNERAGGAKQPRFLRLDVKSRPLDSGISGPMQQAIGQTLA
AGQQVLVFLNRRGFAPTLLCHDCGWMSECQRCDARMTVHQRSGELRCHHCGYVERVPRHC
PKCGKVDLRPVGAGTERAEERLAILFPDVPVLRVDRDSTSRKDAMNQLFATIQKGQPCIL
VGTQMLAKGHHFPRVTLVSILDADGGLFSGDFRASERMAQLIVQVAGRAGRAEEPGKVII
QTHLADHPLLVQLTEQGYFAFAEQALSERRSAGLPPFAHLALLRAEAHKPGQAEGFLDEA
CSEAERLLAEQNLTGIELLGPVPAPMERRAGRYRAQLLLQATARAPLHRLLSSWLLALEQ
MPSGRAVRWSLDVDPVDLY
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgacgccattttgcgcctcgccctgccttcgccgctgcgccgcctgttcgattac
cgtgccccggccgggatcctgcgcgcccagttgcaaccgggcatgcgcctgcgggtgccg
tttggccggcgggagatgatcgggattctggtggaggtcaccgacaccagcgaagtcccg
gtggaaaagctcaaaccggcgctggccctgctcgacgccaccccgccgttaccaccagca
ctgttcaagctgtgcctgtggacctcgcagtattaccagcacagcctcggtgacaccttg
agctgggcgcttccggtgttgctgcgccaaggcgaattggccgaggcgcgccaggaacgc
ttctggtccgccgcgcccggtgccagcctggatgatccgcgtatcgcccgtgccccgcgc
cagcgcgaagccctggccacgttggcccagcaccctcacggcgtggcccatcagttgttg
agcaaactgatgctgagcaaggacagcctggatctgctgctggccaaggatctggtgcag
gtggaaatccgcaagcacgctcccggcgcccgccacgaacattggctggcgcaaccggaa
ttgccgctcaaccctgagcagcgtgccgcgtatgaagcgattcgcgccgggttcgacagt
tatcatgcgttcctgctggccggcgttaccggcagcggcaagaccgaagtctatttgcag
ctgatccgcgagaccctcgaagccggcaagcaggcgctggtgctgatcccggagatcaac
ctcggcccgcaaaccctggcgcgcttcgagcagcgtttcaatgcgcgcatcgccctgatt
cactcggcagtcaatgatcgggagcgcctcgaggcctggctcgcggcccgggacggtgac
gccgacatcattatcggcacccgttcggcactgttcacgccgatgaaaaatcccggcctg
atcatcatcgacgaagagcacgacggctcctataaacagcaggaaggcctgcgctatcac
gcccgcgatctggctttggtgcgcgcgcggcaggaaaacatcccgattgtcctcggctcc
gccacgccttcactggaaagcctgcacaacgcctacaccggtcggtatgggctcctacgc
ctgaacgagcgggctggcggcgccaagcaaccgcgattcctgcgtctcgatgtaaaaagc
cgtccgctggacagcggtatttccgggccgatgcagcaagccatcggccagacgctggcg
gctggtcagcaagtccttgtgtttctcaatcgtcgcggctttgcgccgacgctgctgtgt
catgactgcggctggatgtccgagtgccagcgctgcgatgcgcggatgaccgtgcaccag
cgctccggcgaattgcgctgccaccattgcggctacgtggaacgcgtgccgcggcattgc
ccgaagtgcggcaaggtcgatttacggccggtgggtgccggcaccgaacgcgcagaagag
cgcctggcgattctgttcccggacgtcccggtactgcgggtcgaccgcgacagtacgtcg
cgcaaggacgcgatgaatcagttattcgccaccatccagaaaggccagccgtgcattctg
gtgggcacgcaaatgctcgccaaagggcaccactttccacgggtaacgctggtgtcgatt
ctcgatgccgacggtggattgttctctggcgacttccgcgccagcgagcgcatggcacag
ttgatcgttcaggtggcaggccgggccgggcgggcagaagagccgggcaaggtgattatc
cagacgcacctggccgatcatcctctgctggtgcaattgaccgaacaaggctatttcgcc
tttgccgaacaggccttgagcgaacgccgctcggcaggattgccgccgtttgcgcatttg
gcgttgctgcgggccgaagcgcataaaccgggacaggccgaaggttttctcgatgaagcg
tgtagcgaggccgagcgcttgctggctgagcagaatctgaccggtattgagctgctcggc
ccggtgccggctccgatggagcgccgggccgggcgttatcgtgcgcagttgttgttgcaa
gccacggcccgggcgccgttgcatcggctgctgagtagctggttgctggcgctggagcag
atgccgagcgggcgggcggtgcgttggtcgctggatgtggatcccgtcgatttgtattga
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