KEGG   Pseudomonas mandelii: OU5_3990
Entry
OU5_3990          CDS       T03626                                 
Name
(GenBank) exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
pman  Pseudomonas mandelii
Pathway
pman03030  DNA replication
pman03430  Mismatch repair
pman03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pman00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    OU5_3990
   03430 Mismatch repair
    OU5_3990
   03440 Homologous recombination
    OU5_3990
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pman03032]
    OU5_3990
   03400 DNA repair and recombination proteins [BR:pman03400]
    OU5_3990
Enzymes [BR:pman01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     OU5_3990
DNA replication proteins [BR:pman03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     OU5_3990
DNA repair and recombination proteins [BR:pman03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     OU5_3990
SSDB
Motif
Pfam: RNase_T Rv2179c-like RNase_H_2
Other DBs
NCBI-ProteinID: AHZ71069
UniProt: A0A024EDQ3
LinkDB
Position
complement(4486243..4486950)
AA seq 235 aa
MSLFSWLRPAGPSLTAELQLRLQRLPSAADLSECSLREQRWVVLDLETTGLNLNKDRVLS
IGAVVIEDGAIDFSQQFERTLQCADMKVGPSVLIHGLGPSAIAAGSDPAQALVEFMEFVR
DSPVLAFHAPFDQHMLGRSLKEHLGYKLQNTFLDVADIAPLLCPQAHIRDAGLDDWIDWF
KLEVFERHNASADALATAELALILFSRARQQQIHSPLNLQQRVSQWKRRQRAPSF
NT seq 708 nt   +upstreamnt  +downstreamnt
atgagcctgttttcatggctgcgtccggcaggcccaagcctgaccgctgaactccagcta
cgtctgcaacgcttaccctcggcggccgatctgagtgaatgcagcctgcgcgagcagcgc
tgggtggtgctcgacctggaaaccaccgggctgaacctgaacaaggaccgggtgttgtcc
atcggcgcggtggtgatcgaagacggagcgatcgatttcagccagcagttcgaacgcacg
ctgcaatgcgccgatatgaaggtagggcccagcgtattgattcatggtctggggcctagc
gcgattgccgctggcagcgatccggctcaggcactggtcgaatttatggagttcgtcaga
gacagcccggtgctggcgtttcatgctccgttcgatcaacacatgctggggcgttcgctg
aaagagcatctgggctacaaattgcagaatacctttctggatgtggcggacatcgcaccg
ttgctgtgtcctcaggcgcacattcgcgatgccgggctcgatgactggatcgactggttc
aagctggaagtcttcgaacgccacaacgccagcgccgatgcgttggccacggcggagctg
gcgttgattctgttcagccgggcgcggcagcagcagattcatagcccgttgaatttgcag
cagcgggtgagtcagtggaaacgccggcagcgtgcgccgtccttctaa

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