Pseudomonas mandelii: OU5_4667
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Entry
OU5_4667 CDS
T03626
Name
(GenBank) putative exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
pman
Pseudomonas mandelii
Pathway
pman03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pman00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
OU5_4667
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pman03400
]
OU5_4667
Enzymes [BR:
pman01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
OU5_4667
DNA repair and recombination proteins [BR:
pman03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
OU5_4667
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
DUF2064
Motif
Other DBs
NCBI-ProteinID:
AHZ71746
UniProt:
A0A024EGQ0
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All DBs
Position
complement(5192380..5193759)
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AA seq
459 aa
AA seq
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MIKDPFARLGLDREVLTVSQLNGRARVLLEDVFSNIWVEGEISNLARPASGHVYFTLKDS
GAQVRCALFRQNAARVRQALKDGLAVKVRGKVSLFEGRGDYQLILDTVEPAGDGALRLAF
DALKEKLSAEGLFSAERKVPLPAHPQRIGIISSPTGAVIRDIISVFRRRAPQVQLTLIPT
AVQGREATAQIVRALKLADARGFDALILARGGGSLEDLWCFNEEAVARAVDACVTPIVSA
VGHETDVSISDFVADVRAPTPSAAAELLAPDSSDLVRRVESLHRRLVMRIRDRLMRDRLR
LEGMSRRLRHPGERLRQQAQRLDDLDMRMRRAFERSLNTRRERLIRLETRLAGQHPGRQL
AMLRQRLDSFAERLPRAMREGLKSRRLQLQSQVQTLQVVSPLATLARGYSILLDERGNAI
RSAEQTHTGQRLKAKLGEGELHVRVEDNHLTPVTLSLLD
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgattaaagatccctttgcaagactcggcctggaccgtgaagtcctgactgtcagccag
ctcaacggccgcgcgcgggtgttgctcgaagacgtgttcagcaacatctgggtcgaaggc
gagatctccaacctcgcccgcccggcgtccggtcacgtgtatttcaccctaaaggacagc
ggtgcccaggtccgttgcgcgctgtttcggcagaacgcggcgcgggttcgccaggcgctg
aaggacggcctggcggtcaaggtgcgcggcaaggtttcgctgttcgaggggcgtggcgac
tatcagctgatcctcgacaccgtggagccggccggtgacggtgcgctgcgtctggcgttc
gatgcactgaaggaaaaactcagcgccgaaggcctgttcagcgccgagcgcaaagtgccg
ttgccggcgcatccgcagcgcatcggcattatcagttcgccgactggcgcggtgattcgc
gacatcatcagcgtctttcgccgccgcgcaccgcaggttcaactgactctgatcccgacc
gccgtacagggccgcgaagcgactgcgcaaatcgtccgcgccctgaaactggcggacgct
cgcggttttgatgcgctgatcctcgcccgtggcggcggttcgctggaagacctctggtgt
ttcaacgaagaagccgtggcccgcgccgtggatgcgtgcgtgacgccgattgtcagcgcc
gtcggccatgaaaccgatgtctcgatcagtgacttcgtcgccgacgtccgcgccccgacg
ccctccgccgccgccgaattactcgcgccggattccagcgacctggtgcgccgggtcgaa
agcctgcaccggcggctggtgatgcgcatccgcgaccgcttgatgcgtgaccgtctgcgc
ctggaaggcatgtcccgccgcctgcgtcaccctggcgaacgtctgcgccaacaagcgcaa
cgtctggacgacctggacatgcgcatgcgccgcgcgttcgaacgcagcctcaatacccgt
cgcgaacgcttgattcgtctggaaacccgcctcgccgggcaacacccgggacggcaattg
gcaatgcttcgtcagcgcctcgacagcttcgccgagcgcctgccgcgagccatgcgcgaa
gggctcaagtcccgtcgcctgcaactgcaaagtcaggtgcagacgctgcaagtggtcagc
ccgctggcgaccctggcccgtggctacagcattctgctggatgaacgcggcaacgcgatt
cgcagcgccgagcaaacccataccggtcagcgcctgaaagccaaactgggcgaaggcgag
ctgcacgtccgggtcgaagacaatcacctgacgcctgtcaccctttctttactggattga
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