KEGG   Pseudomonas mandelii: OU5_5233
Entry
OU5_5233          CDS       T03626                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoamide dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
pman  Pseudomonas mandelii
Pathway
pman00010  Glycolysis / Gluconeogenesis
pman00020  Citrate cycle (TCA cycle)
pman00260  Glycine, serine and threonine metabolism
pman00280  Valine, leucine and isoleucine degradation
pman00310  Lysine degradation
pman00380  Tryptophan metabolism
pman00620  Pyruvate metabolism
pman00630  Glyoxylate and dicarboxylate metabolism
pman00640  Propanoate metabolism
pman00670  One carbon pool by folate
pman00785  Lipoic acid metabolism
pman01100  Metabolic pathways
pman01110  Biosynthesis of secondary metabolites
pman01120  Microbial metabolism in diverse environments
pman01200  Carbon metabolism
pman01210  2-Oxocarboxylic acid metabolism
pman01240  Biosynthesis of cofactors
Module
pman_M00009  Citrate cycle (TCA cycle, Krebs cycle)
pman_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
pman_M00036  Leucine degradation, leucine => acetoacetate + acetyl-CoA
pman_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
pman_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:pman00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    OU5_5233 (lpdA)
   00020 Citrate cycle (TCA cycle)
    OU5_5233 (lpdA)
   00620 Pyruvate metabolism
    OU5_5233 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    OU5_5233 (lpdA)
   00640 Propanoate metabolism
    OU5_5233 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    OU5_5233 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    OU5_5233 (lpdA)
   00310 Lysine degradation
    OU5_5233 (lpdA)
   00380 Tryptophan metabolism
    OU5_5233 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    OU5_5233 (lpdA)
   00670 One carbon pool by folate
    OU5_5233 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pman04147]
    OU5_5233 (lpdA)
Enzymes [BR:pman01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     OU5_5233 (lpdA)
Exosome [BR:pman04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   OU5_5233 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox FAD_binding_2 Pyr_redox_3 FAD_oxidored GIDA FAD_binding_3 HI0933_like NAD_binding_8 AlaDh_PNT_C 3HCDH_N Thi4 DAO 2-Hacid_dh_C Amino_oxidase Lys_Orn_oxgnase DUF3373
Other DBs
NCBI-ProteinID: AHZ72312
UniProt: A0A024EHP8
LinkDB
Position
5793064..5794500
AA seq 478 aa
MTQKFDVVVIGAGPGGYVAAIKAAQLGLSTACIEKYTDKEGKLALGGTCLNVGCIPSKAL
LDSSWKYKEAKEGFAIHGINHAGVTMDVAAMVGRKANIVKGLTSGVATLFKANGVTSLQG
HGKLLAGKKVELTKPDGTVEIIEAENVILASGSRPIDIPPAPVDQNVIVDSTGALEFQSV
PKRLGVIGAGVIGLELGSVWSRLGSQVVVLEALEKFLPAADEAVSKEAFKTLTKQGLDIK
LGARVTGSKVNGDEVVVNYTDANGEQNITFDKLIVAVGRRPVTTELLAADSGVNIDERGF
VFVDDQCTTSVPGVYAIGDVVRGMMLAHKASEEGIMVVERIKGHKAQINYDLIPSVIYTH
PEIAWVGKTEQVLKAEGVEVNVGTFPFAASGRAMAANDTGGFVKVIADAKTDRVLGVHVI
GPSAAELVQQGAIGMEFGTSAEDLGMMVFSHPTLSEALHEAALAVNGGAIHIANRKKR
NT seq 1437 nt   +upstreamnt  +downstreamnt
atgactcagaaattcgacgtggtagtgattggcgcgggccctggcggctacgtggctgcc
attaaagcagcgcaactgggcctctccactgcctgcatcgagaaatacaccgacaaggaa
ggcaaactggccctcggcggtacttgcctgaacgtcggctgcattccatccaaggcgctg
ctggacagctcctggaagtacaaggaagccaaagaaggcttcgcgatccacggtatcaat
cacgctggcgtgaccatggacgtggcggcaatggttggccgtaaagccaacatcgtcaaa
ggcctgacctctggcgtagccaccctgttcaaggcgaacggcgtcacttccctgcaaggc
cacggcaaactgctggctggcaagaaagtcgaactgaccaagccagacggcaccgttgaa
atcatcgaagccgagaacgtgattctggcttcgggctcgcgtccgatcgacattccaccg
gctccggttgaccagaacgtgatcgtcgattcgactggcgcgctggaattccaatccgtt
cccaagcgtctgggcgtgatcggcgctggcgtcatcggtctggaactgggttctgtctgg
tcgcgtctgggttcgcaagtggttgtcctggaagcgctggaaaagttcctgccagccgct
gacgaagccgtttccaaagaagccttcaagaccctgaccaaacaaggtctggacatcaag
ctgggcgctcgcgttaccggttccaaagtgaacggcgacgaagtcgtggtgaactacacc
gatgccaacggcgaacagaacatcaccttcgacaagctgatcgttgccgttggtcgccgt
ccagtgaccaccgaactgttggctgccgacagcggtgtgaacatcgacgagcgcggtttc
gtattcgttgacgaccagtgcaccaccagcgtaccgggcgtttacgcgatcggtgacgtg
gttcgcggcatgatgctggcgcacaaggcgtccgaagaaggcatcatggtggttgagcgc
atcaagggccacaaagcccaaatcaactatgacctgatcccgtctgttatttatactcac
ccggaaatcgcgtgggtcggcaagaccgagcaggtattgaaggctgaaggcgttgaagtt
aacgttggcaccttcccgttcgcagccagtggccgtgccatggcagccaacgacaccggc
ggtttcgtgaaagtcattgctgatgccaagactgaccgcgtattgggcgtccacgtgatt
ggcccgagcgctgcagaactggttcagcagggcgcgatcggcatggagttcggcaccagc
gctgaagacctgggcatgatggttttctcccatccgaccctgtctgaagccttgcacgaa
gctgctctggctgtgaatggcggcgccatccacatcgccaaccgcaagaagcgttaa

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