Pseudomonas mandelii: OU5_5473
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Entry
OU5_5473 CDS
T03626
Symbol
topA
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
pman
Pseudomonas mandelii
Brite
KEGG Orthology (KO) [BR:
pman00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pman03032
]
OU5_5473 (topA)
03400 DNA repair and recombination proteins [BR:
pman03400
]
OU5_5473 (topA)
Enzymes [BR:
pman01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
OU5_5473 (topA)
DNA replication proteins [BR:
pman03032
]
Prokaryotic type
DNA Topoisomerases
OU5_5473 (topA)
DNA repair and recombination proteins [BR:
pman03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
OU5_5473 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_Ribbon_Topo
Zn_ribbon_bTOP1
Toprim
Zn_ribbon_Top1
Zn_ribbon_recom
Motif
Other DBs
NCBI-ProteinID:
AHZ72552
UniProt:
A0A024EI96
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Position
6062050..6064683
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AA seq
877 aa
AA seq
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MGKSLVIVESPAKAKTINKYLGNQYVVKSSIGHIRDLPTSGSASASKEPAAKRGKAAAGE
GPVLTPKEKARKQLVSRMGVDPDHGWKAKYEILPGKEKVIEELRRLAKDADTIYLATDLD
REGEAIAWHLREAIGGDDSRYKRVVFNEITKKAIQEAFSKPGELDIDRVNAQQARRFLDR
VVGYMVSPLLWAKVARGLSAGRVQSVAVKLVVEREREIRAFNPEEYWEVHADLGTAKGAT
VRFDVAREKGEAFKPLNEAQAMAALEKLKASSYSIVKREDKPTSSKPSAPFITSTLQQAA
SNRLGFGVKKTMMMAQRLYEAGYITYMRTDSTNLSADAVTMARTYIEGEFGKKYLPENPN
VYSSKEGAQEAHEAIRPSDANTEPSKLSGMERDAERLYELIWRQFLACQMLPAQYLSTTV
TVGAGDFELRAKGRILKFDGYTRVMPQIAKPGDDDVLPDMAQGDAMKLIKLDPTQHFTKP
PARYSEASLVKEMEKRGIGRPSTYAAIISTIQDRGYVALHNRRFYSEKMGDIVTERLAES
FSNLMDYGFTAGMEENLDDVAQGERDWKNVLDEFYGDFKKKLEVAESAEGGMRANQPVMT
DIPCVLCGRPMQIRTASTGVFLGCSGYSLPPKERCKATVNLVPGDEIAADDEGESESLVL
RGKHRCPICSTAMDAYLLDEKRKLHICGNNPDCAGYEIEEGTYRIKGYEGPSLECDKCGS
EMQLKTGRFGKFFGCTNATCKNTRKLLKSGDAAPPKMDPVKMPELKCEKVNDTYILRDGA
SGLFLAASQFPKNRETRAPLVMEIVPHKDEIDPKYHFLCEAPKKDPDGLPAVIRYSRKTK
EQYVQTEVDGKPTGWKAYYDGGKWTVEDKRPAKVAKA
NT seq
2634 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaatcgctggtcattgtggaatccccggctaaggccaagaccatcaacaagtat
ctgggtaaccaatacgtggtgaagtcgagtatcggccatatccgagacctgcccaccagc
ggttcggctagcgccagcaaagagcctgccgccaagcgcggcaaggccgccgcgggtgaa
ggtccggtgctcacgccgaaagagaaggcgcgcaagcagctggtctcgcgcatgggtgtc
gatcccgatcatggctggaaagccaagtacgagatcctcccgggcaaggaaaaggtcatc
gaagagctgcgccggctcgccaaagatgctgacaccatctatctcgcaaccgacttggat
cgcgagggggaagccattgcctggcacctgcgcgaagccatcggtggtgatgacagccgc
tataagcgcgtggtgttcaacgaaatcaccaagaaagcgattcaggaagccttctccaaa
ccgggcgagctggacattgaccgtgtcaacgcacaacaggcgcgtcgtttcctcgaccgc
gtggtgggttacatggtttcgccactgctgtgggccaaagtcgcccgtggcctgtccgcc
ggtcgcgtgcaatcggtagccgtgaagctggtggtcgagcgtgagcgtgaaatccgcgcg
ttcaaccccgaagaatactgggaagtccacgccgacctcggcaccgccaagggcgccacc
gtgcgcttcgacgtggctcgcgagaaaggcgaagccttcaagccgctcaacgaagcccag
gccatggccgcgctggagaagctcaaggcttccagctacagcatcgtcaagcgcgaagac
aagccgaccagcagcaagccgtcggcgccgtttatcacgtccaccctgcaacaggctgcg
agtaaccgcctgggcttcggcgtgaagaaaaccatgatgatggcccagcgtctgtatgaa
gccggctacatcacgtatatgcgtaccgactccaccaacctctcggccgatgccgtgacg
atggcgcgcacctatattgaaggcgagttcggcaagaagtacctgccggaaaacccgaat
gtctacagcagcaaggaaggcgcacaagaggctcacgaagcgattcgtccgtctgacgcc
aataccgagccaagcaagctgtcgggcatggagcgtgatgcagagcggctctacgagctg
atctggcgccagttcctcgcgtgccagatgctgccagcccaatacctgtcgaccacggtc
accgtcggtgccggtgatttcgagctgcgcgccaagggccgcatcctgaagttcgacggc
tacacccgggtcatgccgcagattgccaagcctggcgatgacgacgtgctgccggacatg
gcccagggcgacgcgatgaagctgatcaagcttgatccgacccagcacttcaccaagccg
ccggcgcgttactcggaagcgagcctggtcaaggagatggaaaaacgcggcatcggtcgt
ccttcgacctacgccgcgatcatttccaccatccaggaccgtggctacgtggcgctgcac
aaccgtcgtttctactcggaaaagatgggcgacatcgtgaccgagcgtctggccgagagc
ttctccaatctcatggactacggcttcaccgccggcatggaagagaatctcgatgacgtg
gctcagggcgagcgcgactggaaaaacgtgctcgacgagttctacggcgacttcaagaag
aaactcgaagtagccgaaagcgccgaaggcggcatgcgcgccaaccagccggtgatgact
gatatcccgtgcgtgttgtgcgggcgtccgatgcagattcgtaccgcatcgaccggcgtg
ttcctgggttgctcgggttacagcctgccgccgaaagaacgctgcaaggccaccgtcaac
ctggtaccgggcgatgaaatcgcggcggacgacgagggtgaatcggaatccctggtactg
cgcggcaagcaccgttgcccgatctgcagcacggcgatggacgcctacctgctggatgag
aagcgcaagctgcacatctgcggtaacaacccggattgcgctggttatgaaatcgaagag
ggcacctatcgcatcaagggctacgaaggtccgagcctggaatgcgacaagtgcggcagc
gagatgcagctcaagaccggccgtttcggcaagttcttcggttgcaccaacgcgacgtgc
aagaacacccgcaaactgctgaaaagcggtgatgcggcgccgccgaagatggatccggtg
aagatgcccgagctgaaatgcgaaaaggtcaacgacacctacatcctgcgcgacggtgct
tctggcctgttcctggcggccagtcaattcccgaaaaaccgcgagacgcgtgctccgctg
gtcatggaaattgtgccgcacaaggatgagatcgatccgaagtatcacttcctctgcgaa
gcgccgaagaaagatccggacggcctgcctgcggtgatccgctacagccgcaagaccaaa
gagcagtacgtgcagactgaagtcgacggtaagccgactggctggaaggcgtactacgac
ggcggcaaatggacggtcgaagacaagcgtccagcgaaggtcgctaaggcttaa
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