Pseudomonas mandelii: OU5_5591
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Entry
OU5_5591 CDS
T03626
Name
(GenBank) hypothetical protein
KO
K21470
L,D-transpeptidase YcbB
Organism
pman
Pseudomonas mandelii
Brite
KEGG Orthology (KO) [BR:
pman00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pman01002
]
OU5_5591
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pman01011
]
OU5_5591
Peptidases and inhibitors [BR:
pman01002
]
Cysteine peptidases
Family C82
OU5_5591
Peptidoglycan biosynthesis and degradation proteins [BR:
pman01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
OU5_5591
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Scaffold
YkuD
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
AHZ72670
UniProt:
A0A024EJC9
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All DBs
Position
6180234..6181940
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AA seq
568 aa
AA seq
DB search
MGFLISGTALGQTSSIEPLNAPTSIIEAGADDNVGQAIQATLEPLKSAFPPLLTAPRNRR
VDVSRLVMDFYTHRAYRAAWTNDSDVAQLIASLNATEADGLTPADFHIDELVRSQTTMHT
TPVTPEQRAAFDLATTHTFITALLQLRRGKVDPSRLDIHWNFDSNGVDPRDDFNAFFAAL
DNHDVAKAFAQAPPQEAVYVGLRQALAQLRGIRDRGGWPKVIVDHSLKPGMDEPAVAQLR
ARMVAAGFLDPRLIHGTQYDGAVTAAVKKYQNEQYLSADGMAGATTLAALNVPVDARIDQ
VRVNMERARWLLYKLQGTFVIVDIAGYKVAMYRDGVPIWRSRVQVGKAARNTPVFQAQIT
YITFNPTWTVPPTILKEDVLPKIQSNPGYLAANRIRVLDREGNVLDPSSVDWTNPRGLTL
RQDAGPDSSLGRVVIRFPNDYAIYLHDTPHRELFAKTIRATSSGCIRVENPLQLVELLFN
DPVRWNSEGIQKQLASGKTENIRLPVKVPVLLAYWTVDLGSDGRVAFKPDVYGYDAPVLR
ALNRPSPMPVLDLHSAVGSVVAAGPARQ
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atgggctttctgataagcggcacagcacttgggcaaacgtcgtcgattgagccgctaaat
gcgcctacctccattatcgaggctggagcggatgataacgtcggtcaagcgattcaggcc
acgcttgaaccgctgaaaagcgcttttccgccgctgctgaccgcaccacgcaatcgtcga
gtggatgtcagccgtctggtcatggatttttatacccatcgtgcctatcgcgcggcgtgg
accaatgacagcgatgtcgcgcaattgatcgccagcctgaacgcgactgaggccgacggc
ttgaccccggcggactttcatatcgatgaattggtccggtcgcaaaccacgatgcatacg
acaccggtgacgcccgagcagcgggcggctttcgatttggcgaccacgcatacgtttatc
accgcgctgctgcagttgcggcggggcaaggtcgacccttcgcggctcgacattcactgg
aattttgattcgaatggcgtcgatccacgtgacgacttcaatgctttcttcgccgcactc
gacaatcacgacgtggccaaggcttttgcccaggcaccgccgcaagaagcggtgtacgtc
ggtttgcgtcaggccctggcgcaattgcgcggcattcgggaccggggcggctggccgaaa
gtgattgtcgaccattcgctcaaacccggcatggacgaaccggcggtcgcgcagttgcgc
gcgaggatggtcgcggccggttttctcgatccgcgattgatccacggcacccagtacgac
ggcgccgtcaccgccgcggtgaaaaagtatcagaacgagcaatacctgagtgcggacggc
atggcaggggcgacaacactggcagcgctgaacgtgcccgttgatgcgcgcatcgaccag
gtccgcgtgaacatggagcgtgcacgttggctgctctacaaactccagggcacattcgtc
atcgtcgatatcgccggctacaaggtggcgatgtaccgcgatggcgtgccgatctggcga
tcccgggtgcaggtcggtaaagcggcacgcaatacgccagtcttccaggcgcagattacc
tacatcacgtttaacccgacctggacagtgccgccgacgatcctcaaggaggatgtgttg
ccgaagatccagagcaaccccggctacctcgccgccaatcgcattcgagtgcttgatcgc
gaaggcaatgtgctcgatccatcgagtgtggactggaccaatccacgcggcctcacgttg
cgccaggacgccgggcctgacagttcgctgggccgggtggtgatccgctttcccaacgac
tatgcgatttacctccacgacacaccgcaccgcgagttgtttgccaaaaccatccgcgcg
accagctcgggctgcattcgggtagagaatccgctgcagcttgtggaattgttgttcaac
gacccggtccggtggaacagcgaaggtattcaaaagcagttggccagcggcaagaccgag
aacattcggcttccggtgaaagtgccggtgttgctggcgtactggaccgtggatttgggc
agcgacgggcgagtggcgttcaagcctgatgtgtatggctacgatgcgccggtgttgcgg
gcgctgaatcggccgtcgccgatgccagtgctggatttgcattcggcggtgggatcggtg
gtggcggcgggaccggcgcggcagtag
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