Pseudomonas mandelii: OU5_5937
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Entry
OU5_5937 CDS
T03626
Name
(GenBank) 2',5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
pman
Pseudomonas mandelii
Brite
KEGG Orthology (KO) [BR:
pman00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pman03016
]
OU5_5937
Enzymes [BR:
pman01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
OU5_5937
Transfer RNA biogenesis [BR:
pman03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
OU5_5937
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Motif
Other DBs
NCBI-ProteinID:
AHZ73016
UniProt:
A0A024EK82
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All DBs
Position
6540341..6540880
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AA seq
179 aa
AA seq
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MTDESREPFKRLFFALNCPPQQRKAIAQWRSALELRSGRPVPAENFHLTLLFLGAVGVAQ
IGEICTAAEKVHIPGIPLRLALDRMEVWRRAGVLVLAPEQAPPELLRLVYALEQAMLPFG
VEETPKAFRPHLTLMRDYRMPVPESATPPEFFLRADRFVLFESHKGRYRALAEWLLAPA
NT seq
540 nt
NT seq
+upstream
nt +downstream
nt
atgactgacgaatcccgtgaaccgttcaagcggctgtttttcgcgctcaattgcccgccg
cagcagcgcaaggccattgctcaatggcgcagcgcccttgagctgcgcagcgggcgtccg
gtgccggcggaaaactttcacctgacattgttgtttttgggggctgtcggcgtggcgcag
attggcgagatctgtacggcggccgagaaggtccacataccgggtataccgctgaggttg
gcgctggatcgaatggaggtctggcgccgggcaggggtgttggtcctggcgccggagcag
gcaccgccggagttgttgcgtctggtgtatgcgctggaacaggcgatgttgccgtttggc
gttgaagagacgccgaaggcgtttcggccgcacctgacgttgatgcgtgattatcgaatg
ccggtgcctgagtccgcgacgccgcccgaatttttcctgcgggctgatcgctttgtcttg
tttgaatcccataaggggcggtatcgggcgctggcggaatggctgctggcccccgcataa
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