Pseudomonas marincola: PMYSY11_0020
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Entry
PMYSY11_0020 CDS
T07318
Symbol
rsmB
Name
(GenBank) 16S rRNA m(5)C967 methyltransferase
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
pmao
Pseudomonas marincola
Brite
KEGG Orthology (KO) [BR:
pmao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pmao03009
]
PMYSY11_0020 (rsmB)
Enzymes [BR:
pmao01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
PMYSY11_0020 (rsmB)
Ribosome biogenesis [BR:
pmao03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
PMYSY11_0020 (rsmB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
RsmF-B_ferredox
NusB
Methyltransf_25
FtsJ
MTS
PCMT
Methyltransf_31
Methyltr_RsmF_N
TetR_C_28
Motif
Other DBs
NCBI-ProteinID:
CAE6880269
UniProt:
A0A8S2B405
LinkDB
All DBs
Position
PMYSY11:complement(22071..23384)
Genome browser
AA seq
437 aa
AA seq
DB search
MNPRLAAARALSAVLSGKASLGSSLPPQLDKVEPRDRGLTQELAFGTARWEPRLSALAEK
LLQKPFKAADKDVEALLLVGLYQLLYTRIPAHAALGETVGCADKLKKPWAKGLLNAVLRR
AQREAEPLLAEMERDPMVRTAHPRWLQKALKAHWPEHWEAICAANNAHPPLMLRVNRRHG
SRDDYLQQLQAAGIEATACTFSRDGIRLIQACDVTTLPGFAEGHVSVQDEAAQLAADLLD
LAPGQRVLDACCAPGGKTCHILEAEPELAGVVAIDLEAKRLVRVRENLARLKLDAELIAA
DGRDVSKWWDGKPFQRILLDAPCSATGVIRRHPDIKLARKAEDIAPLAHLQGELLDALWP
TLAVGGIMLYATCSTLPTENSETIAAFLERTPGARELDIAGPFGLQQPHGRQLLAQMDGH
DGFYYAKLIKIAATPRG
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgaatccgcgtctggctgcagcccgcgccctgagtgcggttctatccggcaaagcttcg
ctgggcagcagcctgccgccacaactcgacaaggttgaaccacgcgatcgcggcctgact
caagagctggcattcggcacggcgcgctgggagccaaggctttcggcgctggccgagaag
cttttgcagaaaccgttcaaggccgccgacaaggacgtcgaggccttgttgctggtcggc
ctgtatcagttgctctacacacgcattcccgcgcacgccgccttgggtgaaaccgtgggt
tgcgccgacaaactgaaaaagccctgggccaagggtttgctcaacgccgtgttgcgccgt
gcccaacgtgaagccgagccactgctggcggaaatggaacgcgacccgatggtgcgcacc
gcgcatccgcgctggctgcaaaaggccctcaaagcccattggcccgagcactgggaagcg
atttgcgcggccaacaatgcgcatcctccgctgatgctgcgggttaatcgccgccacggc
agccgcgatgactatctgcaacaactgcaagcagccggtatcgaagcaaccgcctgcact
ttcagccgcgatggcattcgtctgattcaagcctgcgatgtcaccaccctgcccgggttt
gccgaaggccacgtcagcgtgcaggacgaagccgcgcaactggcggcagacttgctcgat
ctggcgccggggcaacgcgtactcgacgcctgctgcgctccgggcggaaaaacctgccat
atcctcgaagccgagcccgagctggctggcgtggtggcgatagacctcgaagccaagcgg
ctggtgcgcgttcgcgaaaacctcgcgcgcctcaagctcgacgccgaattgatcgccgcc
gacggccgtgatgtcagcaaatggtgggacggcaagccgttccagcggattctgctcgac
gcgccctgttcggccaccggcgtgattcgtcgccatccggacatcaaactggcgcgcaaa
gccgaagacattgccccgctggcgcatcttcagggcgagttgcttgacgcactgtggcca
acgctggcggttggcggcatcatgctctacgccacatgctcgaccctgccgaccgagaac
agcgaaaccatcgcggccttccttgaacgcacgccgggtgcacgcgaactggatattgcc
gggccatttggcctgcagcagccacacggtcgacaattgttggcgcaaatggacggccac
gacggcttctactatgccaagctgatcaaaatcgccgcgactcctcgcggctga
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