Pseudomonas marincola: PMYSY11_0068
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Entry
PMYSY11_0068 CDS
T07318
Symbol
algB
Name
(GenBank) Alginate biosynthesis transcriptional regulatory protein AlgB
KO
K11384
two-component system, NtrC family, response regulator AlgB
Organism
pmao
Pseudomonas marincola
Pathway
pmao02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pmao00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PMYSY11_0068 (algB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
pmao02022
]
PMYSY11_0068 (algB)
Two-component system [BR:
pmao02022
]
NtrC family
KinB-AlgB (alginate production)
PMYSY11_0068 (algB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
AAA
Mg_chelatase
cREC_REC
VpsR
AAA_2
AAA_22
AAA_19
MCM
HTH_29
DUF1858
Xre-like-HTH
nSTAND3
AAA_16
HTH_50
HTH_23
HTH_17
IstB_IS21
HTH_28
Motif
Other DBs
NCBI-ProteinID:
CAE6881071
LinkDB
All DBs
Position
PMYSY11:complement(70692..72038)
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AA seq
448 aa
AA seq
DB search
MDAVEPKSGRILLVDDESAILRTFRYCLEDEGYTVATANSAAQAESLMQRQVFDVCFLDL
RLGDDNGLDVLAEMRVQAPWMRVVIVTAHSAIDTAVDAMQAGAADYLVKPCSPEQLRLAA
SKQLEARQLEARLETLEGQVRQRKNDLDSSSPSMMAVLETARQVAVTDANILILGESGTG
KGELARAIHHWSRRAKKNSVTINCPSLTAELMESELFGHTKGAFTGASESTLGRVSQADG
GTLFLDEIGDFPLSLQPKLLRFIQDKEYERVGDPVTRQADVRIVAATNLNLDEMVRQGRF
REDLLYRLNVITLKLPALRERTEDVLTLAERFLARFVKDYARPARGFSDEALSVLANYSW
PGNIRELRNVIERASIICQEEMVQVIHLGLTESTSNQAPRVGGALSLEELEKSHIAAVMA
SSETLDQAAKALGIDASTLYRKRKQYDL
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atggatgcggtagaacctaaaagcggacgtattttgctggtcgatgacgagtcggcgatc
ctgcgtaccttccgctactgcctcgaagacgagggctacaccgtggcgaccgccaacagc
gcggcgcaggccgaaagcctgatgcaacgccaggtatttgatgtgtgctttcttgacctg
cgcctcggcgatgacaacggcctcgacgtgctcgccgagatgcgcgtacaagcgccttgg
atgcgcgtggtgatagtgaccgcacactcagccatcgataccgccgtggacgccatgcag
gctggcgcggccgattatctggtgaaaccctgcagccccgaacaactgcgtctggccgcc
agcaaacagctcgaagcacggcaactggaagcgcgcctggaaactctggaaggtcaggtg
cgccagcgcaagaacgacctcgactccagcagcccgtcgatgatggcggtgctggaaacc
gcccgccaggtggcggtaaccgacgccaacatccttattctcggcgaatccggcaccggt
aaaggcgaactggcccgcgccattcaccactggagccgccgcgcgaagaagaattcagtc
accatcaactgcccgtcactgaccgcagagctgatggaaagcgaattgttcggtcacacc
aaaggcgcgtttaccggcgccagcgaaagcaccctcggtcgggtcagtcaagccgacggc
ggtacgctgtttctcgacgaaatcggcgatttcccgctcagcctgcaaccgaaactgctg
cgctttattcaggataaggaatacgagcgcgtcggtgatccggtgacccgtcaggccgat
gtgcgcatcgtcgccgcgaccaacctcaatcttgacgagatggttcgtcaggggcgtttc
cgcgaggacctcttgtatcgcctcaatgtgatcactctgaaactgccggcgctgcgcgaa
cgcactgaagacgtgctgacactggccgagcgcttcctggcccgcttcgtcaaggattac
gcccgccccgcgcgcggcttcagcgatgaggcattgagcgttctggcgaattactcctgg
ccgggcaatatccgcgaactgcgcaacgtgatcgaacgggcgagcatcatctgccaggaa
gaaatggttcaggtgattcatctgggcctgaccgaatcaaccagtaatcaggcgccacgc
gtgggcggcgcactgagtcttgaagagctggaaaaaagtcatatcgccgccgtcatggcc
agcagcgaaaccctcgatcaagctgccaaggcactgggtatcgacgcttcgaccctgtat
cgcaaacgcaaacagtacgacctatga
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