Pseudomonas marincola: PMYSY11_0145
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Entry
PMYSY11_0145 CDS
T07318
Name
(GenBank) Filamentous hemagglutinin
KO
K15125
filamentous hemagglutinin
Organism
pmao
Pseudomonas marincola
Brite
KEGG Orthology (KO) [BR:
pmao00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
pmao00536
]
PMYSY11_0145
Glycosaminoglycan binding proteins [BR:
pmao00536
]
Heparan sulfate / Heparin
Microbial pathogens
PMYSY11_0145
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPS
DUF637
Fil_haemagg
Fil_haemagg_2
DUF5649
Motif
Other DBs
NCBI-ProteinID:
CAE6882365
LinkDB
All DBs
Position
PMYSY11:complement(175373..181486)
Genome browser
AA seq
2037 aa
AA seq
DB search
MDVRSTFFQNIACILMGVMFLNPIVSAAAEVTVDAAAGGNTQLGSANNGVPVINIATPNG
NGLSHNKFTDYNVGQQGLILNNSTNSLQSTQLGGYILGNSNLNGRAASVILNEVNGGSPS
QLKGYTEVAGQSAHVIVANPNGITCNGCGFINTPRATLTTGKPVVENGQLQRYDVDGGQI
AIEGVGLNAGNVGQFELITRAAAINAEIQAQQLAIVAGRNEVDAQTLTATAKADDGSAKP
SVAIDSSALGGMYAGAIRLVGTEAGVGVKLAGDMAASGGDIQIDANGQLSLARTAAAGNI
AIKAQDVALTESAYASGNATVTATGAAGQVQLVQGKSLAAGGDLKVEAARIDNQGSLEAG
VRSDGSGNASATLALEGGELVNRGQIQSQGALSADLSRLDNRDGQIVAVGSATVAAQTID
NQRGTLLAQQDMTVQGHDLDNRAGTLASNKALSIEASGTLRNGDDGLILSKEQGLTVEAG
VLDNQNGTLQANSGDLKATATTTLDNSNGKILAGNGKVTLEAKDLLNHAGVLQTDNGAIE
TSSETFDNSQGRTQANSLLITTRQRLDNSNGHLVATHGDVRVESDVAGRSEVINDGGRIV
ATQNVSIDAASLSNKGGSVGAEQIELNLDSHLDNDSGLIEAGETLSLTADSASNAGGKLR
ALGSTGESVFGLGGLFSNDSGLVEIGNARFSLTSGSLSNQQGTLRHVGDQGFRVSLARAG
QAGGNFITNGVFALDVGSWVNTSVLQAQRIDLKVGAFTQTATGKLLSVEDIVATGDTWVN
DGSIETDGELSLILTGKYSGSGALKSQGDMTLRAASAELLQGAQLRAGGQGDIQVSGDLT
NIGQLSAAGDLRLKSASLANLGTLGAAQALRVEAPGIVNWGGLIFSGAEMELRGDSLTNL
NGDIFSLDSLSIAKDDTLAQMSLLENRSGSIESGSDMTLRAASLINRKEAFTLGRTQTSG
HISVVCYDCGGDHHNVDYVATESFETQVSEDSAASRIHSGGNLNIRGGAIANRYSSLSAT
GNIDIVGASLENTGAASGIIERVRRFNTGRITDGTDERFRDAHIYPYNAQPLPKEMPSAL
YRWNLTSDIETLTPTGVGAAAVIQAGGNVSINATQSITNASVLMYQAPQAGNAQTLDTDV
GLTSQPLVVRLNAQLPPDTQQQAVNPLALPGFSLPQGQNGLFRVSTDPSHPYLIETNPLF
ASLKGFLNSDYLLSRIGFSSEQTQRRLGDGLYEQRLIEQAVVARTGKRFLDGLTSNEAQF
RYLMDNAIASKEALNLAPGVALTAEQVAALTHDIVWMQEQEVNGQKVLVPVLYLAQANDR
LAPSGALIQGHDVALFSGGNLNNSGTLRASHNLSLTASNIGNSGLMQASERVSLLATGSI
RNTQGGLINGKDVSAIALTGDIINERSITQEARSGRGFSQLTSVVDKSAGIEASNNLTLS
AGRDIQNIGGSLKAGGDATLSAERDLVIASAAAENGSMRKDKRHFWEKTSTAQYGSDVQV
GGDLDVKASNDITVVASTIKAGGDIDFEAGNDVTIASAANGSSSEYRYKGNGKKINKEDS
TVRQQASIIEARGDLDITADNNLIVSASQLKAGDEAYLYAGDQLALLSAENSDYSLYDKK
KKGSWGSKEAKRDEVTDVRNLGSTITTGGDLTLESGGDQLYRKAGLDSGGDLTLDSGGAI
TFEAVKDMHQESHDESSSSWVWTSMDSKGKVDETLRQSQLTAKGEILISAVDGLHIDVKQ
VNQQTVSQSIDAMVQADPSMAWLKEVEARGDVDWRQVKEVHDKWSDSHSGLGGPAMIIIA
IIVTYFTAGAASGLVGSAAGATAGSGTAFAAGTAATAATTTTAATAATAAGWANVAATAV
LTSAASTATISTINNKGDVGAALKETFNSDNLKNYVVAGTTAGLTAGLYNEWTGTQTGGS
TALTDSTSGALANGGKVAVSNPSGLSSWQGVGQFAANQALQNTTSAVLNKALGRDGSLGD
ALQTSLANTFAAFGFNLVGDIGQANNLQEGGLTKIGLHAVMGGDFQGSCRVSVSRCL
NT seq
6114 nt
NT seq
+upstream
nt +downstream
nt
atggacgttcgtagcaccttcttccagaacattgcctgcatcctgatgggcgtgatgttc
ctcaatcctatcgtcagcgctgcggcggaagtgaccgtcgatgccgctgcaggcggaaac
actcaactgggcagcgccaacaacggcgtaccggtgatcaacatcgccacgcccaacggc
aacggcctgtcgcacaacaagttcactgactacaacgtcggtcagcaggggctgatcctc
aacaactccaccaatagcctgcagagcacccagctgggtggctatatcctcggcaactcc
aacctcaatggccgtgccgccagtgtcatcctcaacgaggtgaacggcggcagccccagc
cagctcaagggctacaccgaggtggccgggcaatctgcccacgtcatcgtggccaacccc
aacggcatcacctgtaatggctgcggcttcatcaacaccccgcgcgccaccctgaccact
ggcaagccggtggtggagaacggccagctgcaacgttacgacgtcgatggtggccagatc
gccatcgagggtgtcggcctcaatgccggcaacgttggccagttcgagctgatcacccgc
gccgccgcgatcaatgccgagatacaggcgcagcagctggccatcgtcgccggtcgtaac
gaggtggatgcacagaccctgactgccacggccaaggccgatgatggcagtgccaaaccg
agcgtggccatcgacagctcggcgttgggcgggatgtatgcgggagccatccgcctggtc
ggcaccgaggccggcgtgggcgtgaaactggccggcgacatggccgccagcggtggtgat
attcagatcgatgccaacggccaattgagcctggcgcgtacggcagcagcgggcaatata
gccatcaaggctcaggatgtggcgctgactgaaagtgcctacgccagcggcaacgcaaca
gtcaccgccaccggtgcggcaggccaggtgcagctggtccaaggcaaaagcctggccgct
ggtggtgatttgaaggtagaggcggcccgcattgacaaccagggcagcctggaagccggc
gtgcgtagcgatggcagcggcaatgcttccgccacactggcgctggaaggtggcgagctg
gtcaatcgaggccagatccagtcccagggggcgttgtccgccgatctgagcaggctggac
aaccgggatggccagatagtcgccgtcggctctgccactgtcgcagcacaaaccatcgac
aaccagcgcggcacgctgctcgcccagcaggatatgaccgtccaggggcacgacctggac
aaccgcgctggcaccctggccagcaacaaggccctgagcatcgaagccagcggcacgctg
cgcaacggcgatgacggcctgatcctgagtaaggagcaaggactcaccgtcgaggccggc
gtcctggataaccagaacggcacgctccaggccaacagcggcgaccttaaggcaacggcc
accacgaccctcgacaacagcaacgggaagattctggccggcaacggcaaggtaacgcta
gaggccaaggatctgctcaaccatgcaggcgtactgcagaccgacaacggcgctatcgaa
accagcagcgagaccttcgacaacagccagggacgcacccaggccaatagcctcctgatc
accacccgccagcgcctggataacagcaacggccacctggtagccacgcacggagatgtg
cgagttgagtcggatgtcgccggcagaagtgaagtgatcaacgatggcggccgcattgtt
gctacccagaacgtatcgatagatgccgccagcctgtccaacaagggcggtagcgtcggt
gcagaacagatcgagctgaacctcgacagtcacctggacaatgacagcggcctgattgag
gctggtgaaacgctgagcctgacggccgactcagccagcaatgctggcggcaagttgcgc
gccctgggctccaccggggaaagcgtattcggcctcggcggcctgttcagcaacgacagc
ggcctggtcgaaattggcaatgcgcgcttcagccttaccagcggctccctgagcaaccag
cagggcaccctgcgccatgtcggcgaccagggcttcagagtaagcctggcccgcgccggg
caggctggcggcaacttcatcaccaacggcgtctttgcgctggatgtgggtagctgggtc
aacaccagcgtgctgcaggctcagcgcatcgacctcaaggtcggcgctttcacccagacc
gccaccggcaaactgctgtcggtggaggacatcgtggccaccggcgacacctgggtgaat
gacggcagcatcgagactgatggtgagctgagcttaatcctgaccggcaagtacagtggc
agtggtgcgctgaagagccagggggacatgactctgagggcggctagcgccgaactgcta
cagggtgcccaactgcgtgcaggtggccagggcgacattcaggtgagtggcgatctgaca
aacattggccagctcagtgcggcaggcgatctccgcctgaagtccgccagtttggccaat
ctgggcaccttgggagcggcccaggcactgcgcgtcgaggcacctggcatagtcaactgg
ggtggcctgatcttcagcggcgcggagatggagctgcgtggtgacagcctgaccaacctc
aatggcgacatcttcagcctagatagtctcagcatcgctaaggatgacacgctggctcag
atgagtctgttggagaaccgctccggcagcatcgagtctggcagcgacatgaccctgcgc
gcggccagcctgatcaatcgcaaggaagccttcacgttaggccgaacacaaacctcgggg
catatcagcgtagtctgctatgactgtggcggtgaccatcacaatgtcgattacgtagca
acggagagcttcgagacccaggtcagcgaagactccgctgcatcacgcatccacagcggc
ggcaacctcaacatccgcggcggggcgattgccaaccgttacagcagcctgagcgcgacg
ggtaacatcgatatcgtaggtgcctccctggaaaataccggggcggccagtggcatcatc
gagcgagtgcgtcgtttcaacaccgggcgcatcacagacggcaccgatgagcgcttccgt
gatgcgcacatctacccttataacgcgcaaccgcttcccaaggagatgcccagtgcgctc
tatcgttggaatctaaccagcgacattgagaccctgacgccgacgggcgtgggtgcggct
gccgtcatccaggccggcggcaatgtctccatcaatgccacccaatcgatcaccaacgcc
tccgtgctgatgtaccaggcgccgcaggcgggcaacgcacagacgctggacaccgatgtg
gggctgaccagccagccgctggtcgtgcgactcaatgcccagctgcctcctgatacacag
caacaggccgtcaacccgttggccctaccaggcttcagtctgccccaggggcagaatggt
ctgttccgggtcagtaccgatcccagccatccctacctgatcgagacgaacccactgttc
gccagcctcaagggctttctcaactcggactacctgcttagtcggattggtttcagcagc
gagcaaacccagcgtcgcctgggtgacggactctacgaacaacgcctcatcgagcaggct
gtcgtcgcccgtaccggcaagcgcttcctcgatggtttgacctccaacgaggcgcagttc
cgctacctgatggacaacgccatcgccagcaaagaggcacttaacctggcacccggtgta
gccctgacggcagagcaggtagccgccctgacccatgacatcgtgtggatgcaggagcag
gaggtgaatgggcagaaggtactggtgccggtgctgtatctggctcaggccaatgatcgt
cttgcaccgtctggcgccctgattcaagggcacgatgtggccttgttcagtggtggcaac
ctgaacaatagcggcaccctgcgtgccagccataacctgagtcttaccgccagcaatatt
ggcaacagcgggttgatgcaggcgagcgagcgcgtctcgctgctggccaccggcagtatc
cgcaatacgcagggtggtcttatcaatggcaaggatgtcagcgccattgccctgacgggc
gatatcatcaacgagcgcagcatcacccaagaggcacgcagcggacgtggattcagtcag
ctcaccagcgtggtcgacaagtccgcgggaatcgaagccagcaacaatctgaccctctct
gctggccgcgacatccagaatatcggcggcagcctcaaggcgggtggcgacgccacgctg
agtgcagagcgcgatctggttatcgcctcagctgccgcagagaacggcagcatgcgcaag
gacaaacgccacttctgggaaaagaccagcaccgctcaatacggcagtgatgtgcaggtg
ggtggcgacctcgatgttaaagcgagcaacgacattacggttgtcgccagcacgataaaa
gccggaggcgacatagattttgaggcgggtaacgacgtcaccattgcctctgccgcgaac
ggatccagcagcgagtatcggtacaaaggcaacggcaaaaaaatcaacaaggaagacagc
actgtccgtcagcaggccagcattatcgaggcccgcggtgatctcgatataaccgcagac
aacaacctgatcgtcagtgccagccagctgaaagccggcgacgaagcctatctctatgcc
ggcgatcaactcgccctgctgtccgccgagaacagcgactacagcctctatgacaagaag
aaaaaaggctcgtggggcagcaaggaagccaagcgcgatgaagtcaccgatgtgcgcaat
ctcggcagcaccatcactactggcggcgatctgaccctggaaagtggcggtgaccagctg
taccgcaaagcaggcctggacagcggtggtgatctgaccctcgatagcggcggagccatt
accttcgaagccgttaaggacatgcaccaagagagtcacgacgagagcagcagtagctgg
gtctggaccagcatggacagcaaaggcaaggtcgacgaaaccttgcggcagagccagctc
acggccaaaggcgaaatcctgatcagtgccgttgacggcctgcacatcgatgtcaaacag
gtcaaccaacaaactgttagccaatcgatcgatgccatggtgcaagccgacccgagcatg
gcctggttgaaggaagttgaagcacgcggtgatgtggactggcgccaggttaaagaagtg
cacgacaagtggagcgacagccactccggattgggcggcccagcgatgattatcatcgcg
atcatcgtcacttacttcacggcaggggcagcctccggcttggttggttctgcagccggc
gcaactgctggttcgggcactgcattcgcagcaggcactgcggctactgctgccaccacg
acgacagccgctacggcggccactgcagctggctgggcgaacgttgccgcaacagccgta
ctgacctctgccgccagcaccgccactatcagcaccatcaacaacaagggtgatgtcggc
gccgcgctgaaggaaaccttcaacagcgacaacctgaagaactacgtcgtagcgggtaca
actgctggcttaaccgctgggctgtacaacgaatggacgggcacccagaccggcggcagt
actgcgctgaccgactccaccagtggcgcattggccaacggcggaaaagttgcagtgtcg
aaccccagcggtttgagtagctggcagggcgttggccagttcgctgcgaaccaggcactg
cagaacaccacctcggcggtgctcaacaaagcgctgggacgtgatggcagcctgggggat
gccctgcaaaccagcttggccaatacctttgcagcctttggcttcaatctcgttggtgac
atagggcaggcaaataacctgcaagaaggcggcctcaccaaaattggtctgcacgccgta
atgggcggcgattttcaaggtagttgtcgcgtgagcgtgtcacgctgcctttga
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integrated database retrieval system