Pseudomonas marincola: PMYSY11_0291
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Entry
PMYSY11_0291 CDS
T07318
Symbol
mutM
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
pmao
Pseudomonas marincola
Pathway
pmao03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pmao00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PMYSY11_0291 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmao03400
]
PMYSY11_0291 (mutM)
Enzymes [BR:
pmao01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
PMYSY11_0291 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
PMYSY11_0291 (mutM)
DNA repair and recombination proteins [BR:
pmao03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PMYSY11_0291 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
DZR
Motif
Other DBs
NCBI-ProteinID:
CAE6884895
LinkDB
All DBs
Position
PMYSY11:341791..342603
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AA seq
270 aa
AA seq
DB search
MPELPEVETTRRGIAPHLEGQRIRRVIVRDRRLRWPIPDDLDIVVSGQLIESVERRAKYL
LIKLETGSLISHLGMSGNLRVVPCGTPAAKHEHVDIELESGMALRYTDPRRFGALLWSNT
PHEHVLLSKLGPEPLTETFAGERLYEMSRGRSMAVKPFIMDNAVVVGVGNIYATEALFAA
GIDPRREAGTISKARYIKLAIEIKRILAHAIERGGTTLRDFIGGDGKPGYFQQELFAYGR
GGEFCKVCGSTLREIKLGQRASVYCPRCQR
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaattacctgaagtcgaaaccacccgccgcgggattgctccgcaccttgaaggg
cagcgcatcaggcgtgtgattgtgcgcgaccgccgactgcgttggccgattcccgacgac
ctcgatattgtcgtgtccgggcaacttatcgagagcgttgagcgacgcgccaagtacctg
ttgatcaagctcgaaaccggcagcctgatcagccatctgggcatgtctggcaacctgcgg
gtggtgccctgcgggactccggcggccaagcatgagcatgtcgacattgagttggaatcg
ggcatggcgctgcggtacaccgaccctcggcgttttggtgcactgctctggagcaatacg
ccgcatgagcatgtgttgctcagcaagctgggcccggaaccattgaccgagacgtttgca
ggcgagcgcctgtacgagatgtctcgcggacgttcaatggcggttaagccgttcatcatg
gataacgcggtggtggtcggcgtcggcaatatttacgcaaccgaggcgttgttcgccgcc
ggaattgatccccggcgcgaggctgggacaatttccaaggcgcgctacatcaaactcgcg
atcgagattaaacgcatccttgcccatgcaatcgagcgcggcggcaccacattgcgcgac
tttattggcggcgacggcaagcctggctatttccagcaggagttgtttgcttatggtcgc
ggcggcgagttctgcaaggtctgtggcagtaccttgcgcgaaatcaaactgggtcagcgg
gcgagtgtttactgcccacgttgccagcgctga
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