Pseudomonas marincola: PMYSY11_0428
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Entry
PMYSY11_0428 CDS
T07318
Symbol
rpoH
Name
(GenBank) RNA polymerase, sigma 32 (sigma H) factor
KO
K03089
RNA polymerase sigma-32 factor
Organism
pmao
Pseudomonas marincola
Brite
KEGG Orthology (KO) [BR:
pmao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmao03021
]
PMYSY11_0428 (rpoH)
Transcription machinery [BR:
pmao03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PMYSY11_0428 (rpoH)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
UCR_14kD
ImpA_N
HTH_25
Motif
Other DBs
NCBI-ProteinID:
CAE6887296
LinkDB
All DBs
Position
PMYSY11:470747..471601
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AA seq
284 aa
AA seq
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MSTSLQPVHALVPGANLEAYVHAVNGIPLLSPEQERELAESLFYKQDLEAARQMVLAHLR
FVVHIARSYSGYGLAQADLIQEGNVGLMKAVKRFNPEMGVRLVSFAVHWIRAEIHEFILR
NWRIVKVATTKAQRKLFFNLRSQKKRLAWLNNDEVHAVAESLGVEPREVREMESRLTGHD
MAFDPANDADDESAFQSPAQYLEDNRYDPAQQLENADWSDSSSANLHEALQGLDERSRDI
LYQRWLAEEKATLHDLAAKYNVSAERIRQLEKNAMNKLKGSIAA
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgtccacttcattgcaacctgtacatgctttggttccaggcgcaaacctggaggcatac
gtgcatgcggtcaacggcattccactgctgtcgccggagcaggaacgcgagctggccgaa
agccttttttacaagcaggacctcgaagctgcacggcagatggtgctcgcgcatctgcgt
ttcgtcgtgcacatcgcccgtagctattctggctatggcctggctcaggcagacctgatc
caggaaggtaatgttggcctgatgaaggccgtgaagcgtttcaacccggaaatgggtgtg
cgtctggtgtcgtttgcagtgcattggattcgtgccgaaatccacgagttcattttgcgt
aactggcgcatcgtcaaagtggcgaccaccaaagctcagcgtaagctgttcttcaacctg
cgcagccagaagaagcgtcttgcctggctgaacaacgatgaagtgcacgctgttgccgag
agcctcggggttgagccgcgcgaagtgcgcgagatggaaagccgcctgaccggccacgac
atggcctttgatccggccaacgacgcggacgacgaaagcgcattccagtcgccagcccag
tatctggaagacaaccgttacgacccggcgcaacagctggagaatgcggattggtccgac
agctcaagcgctaatctgcacgaagcgctgcaaggcctcgacgagcgcagccgtgacatc
ctctatcagcgctggttggctgaagagaaggccacgctgcatgacctggccgctaagtac
aacgtgtctgccgagcgtattcgtcagctcgaaaagaacgcgatgaacaagctcaaaggc
tcgatcgcagcctga
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