Pseudomonas marincola: PMYSY11_1215
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Entry
PMYSY11_1215 CDS
T07318
Symbol
phr
Name
(GenBank) deoxyribodipyrimidine photolyase (photoreactivation)
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
pmao
Pseudomonas marincola
Brite
KEGG Orthology (KO) [BR:
pmao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmao03400
]
PMYSY11_1215 (phr)
Enzymes [BR:
pmao01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
PMYSY11_1215 (phr)
DNA repair and recombination proteins [BR:
pmao03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
PMYSY11_1215 (phr)
Prokaryotic type
PMYSY11_1215 (phr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
CAE6900612
LinkDB
All DBs
Position
PMYSY11:complement(1275262..1276713)
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AA seq
483 aa
AA seq
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MNQLMWFRTDLRVSDNSALAAAMNAGPTVAVFLLSPAQWARHDDAPCKVDFWLRNLAELS
AALAELNVPLLVRNADLWDQAPQVIAQLCEQLSVEAVHVNEEYGINETQRDNAVAAELDN
HGVHWSSHFDQLLFQPGSILTQAGQYFQVFSQFRKVCYQHLQRAVPAIVDTPKAQAELSV
KADKVPQSVYGFASPSATLQALWPAGEAVAQQRMQHFGDEHIRDYQTARDLPAVPGTSQL
SSYLAAGVISVRQCLQQALLHNYGEFSDGNNGVVTWINELLWREFYKHILVGYPRVCRHR
AFRLQTEYLPWRKAPQDLVAWQEGRTGIPIIDAAIRQLLETGWMHNRLRMIVAMFLTKNL
LIDWREGERFFMRHLIDGDLAANNGGWQWSASTGTDAVPYFRIFNPVSQSQRFDPEGRFL
RRWLPELIGLNNKDIHNPDAMGGLFRLSDYPRPIVDLSKSRERALSAFKNLPTRSELNLE
AAY
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaattaatgtggtttcgcacagacctgcgagtcagcgacaacagcgcacttgcc
gccgccatgaacgcaggcccaaccgtggccgtgtttctactgagccctgcacaatgggcg
cgccacgatgacgcgccgtgcaaggtcgacttctggctgcgcaaccttgccgagctgagc
gctgcgctggcagaactcaatgtgcccctgctggtgcgtaacgccgacctctgggaccag
gcgccgcaggtcattgcccaattgtgcgagcagctgtctgtggaggccgtgcacgtcaat
gaggaatacggcatcaacgagacgcagcgagataatgccgtcgccgctgagttggacaat
cacggcgtgcactggagcagccacttcgaccaactgctgtttcagcccggcagcatcctg
acccaggctggccagtactttcaggtattcagccaatttcgcaaggtctgctatcagcac
ttgcagcgcgccgttccagccattgtcgacaccccaaaggcgcaggccgagctgtcggtc
aaagccgataaagtcccgcaatcggtctacggatttgcatcgccgagtgcgacgttacaa
gcgctctggcccgccggagaagcggttgcgcaacagcgtatgcagcactttggtgatgag
cacattcgcgactaccaaactgcccgtgacctgcccgcagtgcccggcaccagccagttg
agcagctatctggcagcgggcgtgatctcggtgcgccagtgtttacagcaggccttgctg
cacaactacggtgagttttccgatggcaacaacggcgtcgtaacctggattaacgaactg
ctctggcgagagttctacaagcatattctggtgggttatccgcgcgtgtgccgtcaccgc
gcattccgcctgcaaaccgaatacctgccttggcgtaaagcaccgcaggaccttgtggcc
tggcaagagggccgcacgggtataccgattattgatgcggcgattcgccaactgctggaa
accggctggatgcacaaccggttgcgcatgatcgtggcaatgttcctgaccaagaacctg
ttgatcgactggcgcgaaggtgagcgcttcttcatgcgccatctgattgatggtgatctg
gcggccaacaatggcggctggcaatggagcgcctcgaccggcacggatgcagtgccctac
ttccgcatcttcaacccggtcagccagtcgcaacgctttgatccagaggggcgctttctg
cgccgttggctgccggagctgattggcctaaacaacaaggacattcacaaccccgatgcc
atgggcgggctgttccgtctcagcgattacccgcggccaatcgtagacctgagcaagagc
cgcgagcgcgccctcagtgcgttcaagaatctgcctactcgcagcgaacttaacctggag
gcggcctactga
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