Pseudomonas marincola: PMYSY11_1216
Help
Entry
PMYSY11_1216 CDS
T07318
Name
(GenBank) Transcriptional regulator, MerR family
KO
K22491
MerR family transcriptional regulator, light-induced transcriptional regulator
Organism
pmao
Pseudomonas marincola
Brite
KEGG Orthology (KO) [BR:
pmao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pmao03000
]
PMYSY11_1216
Transcription factors [BR:
pmao03000
]
Prokaryotic type
Helix-turn-helix
MerR family
PMYSY11_1216
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MerR_1
MerR
B12-binding_2
HTH_28
MlrA_C
HTH_Tnp_1
Frtz
HTH_17
HTH_23
Motif
Other DBs
NCBI-ProteinID:
CAE6900631
LinkDB
All DBs
Position
PMYSY11:complement(1276725..1277687)
Genome browser
AA seq
320 aa
AA seq
DB search
MSEQHALPPDQAEPGQNAGDDYQSAIAEGYLPIREVARITGVNAVTLRAWERRYGLIVPH
RTPKGHRLYHQNHVERIQAILTWLNRGVAVSQVKGLLRGNNAQVQEADSQWQQKCLHMQS
AIYSLNERSLDECLNRELAVYPPHTLYTQLLKPLLDALQLRWQGQFGSQVEQVFFYSWLR
SKLGARVYHNNRQHNSAPVLMINLSDLPMAPELWLSAWLVSSAECPVEVYDWPIPAAELA
LIAEHVQPRALLLHSSQSLNSQQLPKLIGSCDCPCLITGATVEIHQQLLEQLAADNSQLL
IARDPLASVHALSDLDLLNS
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagcaacacgcgttgccgccggatcaggcggagcctgggcaaaatgctggcgat
gactaccagagcgccatcgccgaaggctatttgccgattcgcgaagtcgcgcgtatcacc
ggcgtcaacgcggtgaccctccgcgcgtgggagcgccgttatggcctgatcgtgccgcac
cgcacgcccaagggtcatcgcctctatcaccagaatcatgtcgagcgtattcaggccatc
ctgacgtggctcaaccgcggcgttgcggtcagtcaggtcaaggggctgctgcgcggcaac
aacgctcaggtgcaggaagctgattcgcagtggcagcaaaaatgcctgcacatgcagagc
gcaatctacagcctcaatgagcgcagcctcgatgaatgtttgaatcgtgagctggctgtc
tatccgccgcacacgctttacacccaactgctcaagccattactcgatgccttgcaatta
cgctggcagggtcagttcggcagccaggtcgagcaagtgtttttctactcgtggctgcgc
agcaaactgggcgcgcgggtgtatcacaacaaccgccagcacaactcggcaccggtgttg
atgatcaatttgtccgacctgccgatggcgccggagctttggctcagcgcctggctggtg
agcagcgctgaatgtccggtcgaagtttacgactggccgatcccggcggccgaactggca
ctgattgctgaacacgtccagccgcgcgccctgctcctgcattccagccagagcctgaac
agccagcaattgccgaagttgattggcagctgtgattgcccctgcctgattaccggcgcg
accgtagaaattcatcagcaattgctggagcaactggcggcagataacagccagctgctg
atcgcccgcgacccgctggcgagcgtacacgccttatccgatctcgatttgctgaatagc
tga
DBGET
integrated database retrieval system
