Pseudomonas marincola: PMYSY11_1501
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Entry
PMYSY11_1501 CDS
T07318
Symbol
oprD
Name
(GenBank) Porin D
KO
K18093
imipenem/basic amino acid-specific outer membrane pore [EC:3.4.21.-]
Organism
pmao
Pseudomonas marincola
Pathway
pmao01501
beta-Lactam resistance
pmao02020
Two-component system
Module
pmao_M00745
Imipenem resistance, repression of porin OprD
Brite
KEGG Orthology (KO) [BR:
pmao00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PMYSY11_1501 (oprD)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
PMYSY11_1501 (oprD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pmao02000
]
PMYSY11_1501 (oprD)
01504 Antimicrobial resistance genes [BR:
pmao01504
]
PMYSY11_1501 (oprD)
Transporters [BR:
pmao02000
]
Other transporters
Pores ion channels [TC:
1
]
PMYSY11_1501 (oprD)
Antimicrobial resistance genes [BR:
pmao01504
]
Gene sets
beta-Lactam resistance modules
Imipenem resistance, repression of porin OprD [MD:
M00745
]
PMYSY11_1501 (oprD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OprD
DUF5777
Motif
Other DBs
NCBI-ProteinID:
CAE6905336
LinkDB
All DBs
Position
PMYSY11:complement(1573574..1574872)
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AA seq
432 aa
AA seq
DB search
MQVMKWSTIALAVAAGSTQMAFASSQSESNGFIEDSSFDIFNRVLYMNRDFRNGASNTAG
SGNGYREETGWGLRTLFESGFTQGTIGVGFDAHTLSSLALDSGRGRFGTGQFDQSSDGSA
EKTQTEVGGAIKFRVSNTGLKYGSQFVGSPVFSTDDSRILPEVATGTYLVSNEIEGLELS
GGRFTAMSSQTSTDRDTFELKAANIYGANYAFTDNLSAGLHYSDVEDYWKKTYLNVNWNL
PIAEGQNLNFDVNGYHTKGDGQELGATDDGKGGLSTDNDLWSIAAAYGIGAHTFTVAYQR
STGDASLYNYGVDGGGTIWVANSVQYSDFVSRDEQSYQARYDLNMAEYGVPGLSFMARYI
YGDNIDTGVAGEEGKEHEFDFETKYVIQSGAAKDLSFRIRSAIYRANDAQNDFYSADVND
FRFIMDYPLDVM
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgcaagtgatgaagtggagcacaatcgccctggcagtagccgcgggctcgacgcagatg
gctttcgcctctagccaatccgaatcgaacggttttatcgaagacagcagcttcgacatc
ttcaaccgcgttctgtacatgaaccgtgacttccgcaacggcgctagcaacactgctggc
tctggtaatggctaccgcgaagaaactggctggggtctgcgcaccctgttcgaatctggc
ttcactcaaggcaccatcggtgtaggctttgacgctcacactctgagcagcctggcactg
gacagcggccgtggccgtttcggtactggccagttcgatcagtcgagcgacggcagcgct
gaaaaaacccagaccgaagttggtggcgcgatcaagttccgcgtttccaacactggcctg
aaatacggtagccagtttgttggcagcccagtgttcagcactgacgacagccgcatcctg
ccagaagttgcaaccggtacttacctggtcagcaacgaaatcgaaggtcttgagctgtct
ggcggtcgtttcactgcaatgagcagccaaacttcgactgaccgtgacaccttcgaactg
aaagcagccaacatctacggtgcaaactacgccttcactgataacctcagcgctggcctg
cactactctgacgttgaagactactggaaaaagacttacctgaacgtcaactggaacctg
ccgatcgcagaaggccagaacctcaacttcgacgttaacggttaccacaccaagggtgac
ggccaggaactgggcgctactgacgacggtaaaggcggcctgtctaccgataacgacctg
tggagtatcgcagcagcttacggtatcggcgctcacaccttcaccgttgcttaccagcgt
tctactggtgatgcatccctctacaactacggtgtagacggcggcggcaccatctgggtt
gccaactcggttcagtactctgacttcgtaagccgtgacgagcagtcttaccaggctcgc
tacgacctgaacatggctgaatacggcgttccaggcctgagcttcatggctcgttacatc
tacggtgacaacatcgacactggtgttgctggcgaagaaggtaaagagcacgagttcgac
ttcgaaaccaaatacgtgatccagagcggcgcagctaaagacctgtcgttccgtatccgt
agcgcgatctaccgtgccaacgatgcacagaatgacttctactctgctgacgtgaacgat
ttccgtttcatcatggactacccgctggacgtgatgtaa
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