Pseudomonas marincola: PMYSY11_1721
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Entry
PMYSY11_1721 CDS
T07318
Symbol
fliA
Name
(GenBank) RNA polymerase, sigma 28 (sigma F) factor
KO
K02405
RNA polymerase sigma factor FliA
Organism
pmao
Pseudomonas marincola
Pathway
pmao02020
Two-component system
pmao02025
Biofilm formation - Pseudomonas aeruginosa
pmao02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
pmao00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PMYSY11_1721 (fliA)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
PMYSY11_1721 (fliA)
09142 Cell motility
02040 Flagellar assembly
PMYSY11_1721 (fliA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmao03021
]
PMYSY11_1721 (fliA)
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
pmao02035
]
PMYSY11_1721 (fliA)
Transcription machinery [BR:
pmao03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PMYSY11_1721 (fliA)
Bacterial motility proteins [BR:
pmao02035
]
Flagellar system
Flagellar assembly proteins
Stator
PMYSY11_1721 (fliA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
HTH_30
UPF0122
GerE
Rv2175c_wHTH
Motif
Other DBs
NCBI-ProteinID:
CAE6908670
LinkDB
All DBs
Position
PMYSY11:1770010..1770753
Genome browser
AA seq
247 aa
AA seq
DB search
MSNAGLRMYSKAQAMDAQHQLIERYAPLVKRIAYHLLARLPANVQVDDLIQAGMLGLLEA
SKKYDASKGASFETFAGIRIRGSMLDEVRKGDWAPRSVHRNSRMVSDAIRKIEARTGRDA
KDQEVAAELQLSLEDYYGILGDTLGSRLFSFDDLLQDGEQGGLQEDVNSHHPGPSRELED
ERFQSALADAIGNLPERERLVLSLYYDEELNLKEIGEVLGVSESRVSQLHSQCAARLRAR
LSEWRAK
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacgcaggcctacgtatgtatagcaaggcgcaagccatggacgctcagcatcag
ttgattgaacgttacgcgccgcttgtcaaacgtatcgcctaccacttgctggccagactg
ccggcaaacgttcaggtcgacgacctgattcaggccggcatgctcggcctgctggaagca
tcgaagaaatatgacgccagcaaaggcgccagtttcgaaacctttgccggtatccgcatt
cgtggctccatgctcgatgaggtgcgcaaaggcgactgggccccccgttcggtccatcga
aatagccgcatggtcagtgatgcaattcgaaaaattgaagccagaacgggtcgagacgct
aaagatcaggaggttgctgccgaactccaattgagtctcgaagattactacggcattctt
ggcgacactttgggcagtcgcctgttcagttttgacgaccttttacaggacggtgagcag
ggcggattgcaggaagacgtcaatagtcatcatcccggcccttcgcgtgagctggaagac
gagcgctttcaaagcgcactggcagacgccatcggcaatctgccggagcgtgaacgcctg
gtcttgtcgctgtactacgacgaagagctgaacctcaaggaaattggtgaggtgcttggg
gtgagtgagtctcgggtaagccagttacacagccagtgtgccgctcgtttgcgggcgcgg
ctgagtgagtggcgggcgaagtaa
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integrated database retrieval system
