Pseudomonas marincola: PMYSY11_1815
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Entry
PMYSY11_1815 CDS
T07318
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
pmao
Pseudomonas marincola
Pathway
pmao03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pmao00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PMYSY11_1815 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmao03019
]
PMYSY11_1815 (recQ)
03400 DNA repair and recombination proteins [BR:
pmao03400
]
PMYSY11_1815 (recQ)
Enzymes [BR:
pmao01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PMYSY11_1815 (recQ)
Messenger RNA biogenesis [BR:
pmao03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
PMYSY11_1815 (recQ)
DNA repair and recombination proteins [BR:
pmao03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
PMYSY11_1815 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
HTH_40
ResIII
Sigma70_r4_2
HTH_23
GerE
Motif
Other DBs
NCBI-ProteinID:
CAE6910077
LinkDB
All DBs
Position
PMYSY11:1867306..1869432
Genome browser
AA seq
708 aa
AA seq
DB search
MLENAQRILKDVFGYDSFRGRQAAIIERVANGGDALVLMPTGGGKSLCFQVPALLREGLA
VVVSPLIALMDDQVATLDELGVAAVALNSTLSADQQRDIAERIRRREIKMLYLAPERLVQ
PRMLSFLQRLDIALFAIDEAHCVSQWGHDFRPEYLQLGQLAELFPEVPRIALTATADMRT
REEIIERLHLQRAERFLSSFDRPNIFYRIVPKEQPRKQLLGFLSARKGDAGIVYCLSRKK
VDEVAAFLSEQGFPALPYHAGLPSELRAYHQKRFLNEEGLIMVATIAFGMGIDKPNVRFV
AHLDLPKSLEAYYQETGRAGRDGLPADAWMAYGLQDVLLLKQMLNNSEGDERHKRVEQHK
LDAMLALCEETRCRRQALLAYFDEILDKPCGHCDNCTDGVQTWDATEPARQALSAIYRSG
QRYGVGHLVDMLLGRDNERMRKEGHQHLSVFGVGKALSEGEWRSLFRQLVARGLADVDLE
GYGGLRLSESCRPLLRGEVNLQLRRDLKPQQSAKASSSAASQLVRGDEREQWEALRALRR
KLAEEHGVPPYVIFPDATLLEMLRSKPSTLPEMAQVSGVGARKLERYGEAFLQVLSGGEE
APRAVVDLRHELISLACAGMTPAQIANQLQCSQKNVYSMLADALAAQQISLDQALDLPED
LLLEIQDAFLDGEGELPAVSEVSEQFAKRVDEGVLYCVRAALQAEFQL
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atgcttgaaaacgcgcagcgcatattaaaagacgtatttggctatgacagctttcggggc
cgccaggctgcgattatcgagcgagtagccaatggcggcgacgcgctggtgctgatgccg
accggcggcggcaagtcgctgtgctttcaggtgcctgcgctgctgcgcgaaggcctcgcc
gtggtggtttcgccgctgattgcgttgatggacgatcaggtcgcaacgctcgatgagctg
ggtgttgccgccgttgcattgaactcgacactgagtgccgatcagcagcgcgacattgcc
gagcgcattcgccggcgtgaaatcaagatgctttatctggcgcctgagcgtctggtgcag
ccgcgcatgttgagcttcctgcagcgcctggatattgccctgtttgccatcgacgaggcg
cattgcgtgtcgcaatggggccacgattttcgaccggaatacctgcaactgggtcagttg
gccgagttgtttcccgaggtgccgcgtattgcccttacggcaactgccgacatgcgcacc
cgcgaagagatcatcgagcgcttgcatttacaacgcgccgaacgctttctttcaagtttt
gaccggcccaatattttttaccggatcgtgcccaaagagcagccgcgcaagcagctgttg
ggatttttgagcgcgcgtaaaggtgacgccggtatcgtctattgcctgtcgcgtaaaaaa
gtcgatgaagtggccgcgtttctgtctgaacagggttttccggcgttgccttatcacgcc
ggcttgcccagtgagttgcgcgcctaccatcaaaaacgcttccttaatgaggaaggcttg
atcatggtcgcaaccatcgcgttcggcatgggtatcgacaaacccaacgtgcgctttgtc
gcccacctcgatttgcccaagtcgctggaagcctattatcaggaaaccggccgcgccgga
cgtgatggtttacccgccgatgcgtggatggcttacggcctgcaggacgtgttgctgctc
aagcaaatgctcaacaactccgagggcgatgagcggcacaagcgcgtcgagcaacacaag
ctcgatgcgatgcttgccctgtgcgaggaaacccgttgccggcgtcaggcgctgctggcc
tattttgacgaaattctcgataagccctgcgggcactgcgataactgcaccgatggcgtg
caaacctgggatgcgacagaacccgcgcgccaggcgttgtcggccatttatcgcagtggc
cagcgttacggcgtcggccatttggtcgacatgctgctggggcgcgataacgagcggatg
cgcaaggaaggccatcagcacttgtcggtgtttggtgtgggcaaggcgctcagtgaaggc
gagtggcgctcgctgttccgccaattggtcgcacgcgggctggctgacgtagacctcgag
ggctacggcgggctgcggttgtccgagagttgccggccattgttgcgcggagaggtcaat
ttgcagctgcgccgcgatctgaagccgcagcagagtgccaaggcttcaagcagtgccgcc
agccagttggtgcgtggtgatgagcgtgagcagtgggaagcgttgcgcgccttgcgccgc
aaactggcggaagagcacggcgtgccgccttatgtcattttcccggatgcgacgctactg
gaaatgctgcgcagcaaaccgagcactctgccggaaatggcgcaggtcagcggcgttggc
gcgcgtaagcttgagcgttatggtgaggccttcctgcaagtgctgagcggcggtgaagag
gcgccaagagcagttgtcgatttgcggcacgagttgatcagtctggcatgcgccgggatg
acgccggcccagattgccaatcagttgcagtgttcacagaaaaacgtttacagcatgttg
gccgatgcattggccgctcagcagatttcgctggatcaggcgctcgacttgccggaagac
ctgctgctcgagattcaggacgcgttcctggatggcgagggcgagttaccggcggtctca
gaggtgtcggagcaatttgccaagcgggttgatgagggcgttttgtattgcgtgcgtgcg
gccttgcaagcggagtttcagctctag
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