KEGG   Pseudomonas marincola: PMYSY11_2463
Entry
PMYSY11_2463      CDS       T07318                                 
Symbol
lpd
Name
(GenBank) lipoamide dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
pmao  Pseudomonas marincola
Pathway
pmao00010  Glycolysis / Gluconeogenesis
pmao00020  Citrate cycle (TCA cycle)
pmao00260  Glycine, serine and threonine metabolism
pmao00280  Valine, leucine and isoleucine degradation
pmao00310  Lysine degradation
pmao00380  Tryptophan metabolism
pmao00620  Pyruvate metabolism
pmao00630  Glyoxylate and dicarboxylate metabolism
pmao00640  Propanoate metabolism
pmao00670  One carbon pool by folate
pmao00785  Lipoic acid metabolism
pmao01100  Metabolic pathways
pmao01110  Biosynthesis of secondary metabolites
pmao01120  Microbial metabolism in diverse environments
pmao01200  Carbon metabolism
pmao01210  2-Oxocarboxylic acid metabolism
pmao01240  Biosynthesis of cofactors
Module
pmao_M00009  Citrate cycle (TCA cycle, Krebs cycle)
pmao_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
pmao_M00036  Leucine degradation, leucine => acetoacetate + acetyl-CoA
pmao_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
pmao_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:pmao00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    PMYSY11_2463 (lpd)
   00020 Citrate cycle (TCA cycle)
    PMYSY11_2463 (lpd)
   00620 Pyruvate metabolism
    PMYSY11_2463 (lpd)
   00630 Glyoxylate and dicarboxylate metabolism
    PMYSY11_2463 (lpd)
   00640 Propanoate metabolism
    PMYSY11_2463 (lpd)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    PMYSY11_2463 (lpd)
   00280 Valine, leucine and isoleucine degradation
    PMYSY11_2463 (lpd)
   00310 Lysine degradation
    PMYSY11_2463 (lpd)
   00380 Tryptophan metabolism
    PMYSY11_2463 (lpd)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    PMYSY11_2463 (lpd)
   00670 One carbon pool by folate
    PMYSY11_2463 (lpd)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pmao04147]
    PMYSY11_2463 (lpd)
Enzymes [BR:pmao01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     PMYSY11_2463 (lpd)
Exosome [BR:pmao04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   PMYSY11_2463 (lpd)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 FAD_binding_2 HI0933_like FAD_oxidored FAD_binding_3 GIDA DAO NAD_binding_8 3HCDH_N AlaDh_PNT_C Thi4 Lys_Orn_oxgnase 2-Hacid_dh_C Lycopene_cycl UDPG_MGDP_dh_N XdhC_C
Other DBs
NCBI-ProteinID: CAE6921080
LinkDB
Position
PMYSY11:complement(2566525..2567961)
AA seq 478 aa
MSQKFDVVVIGAGPGGYVAAIKAAQLGLKTACIEKYQDKDGKIALGGTCLNVGCIPSKAL
LDSSWKYHEAQEGFAVHGITAKGVSMDVPAMVGRKNTIVKNLTGGVATLFKANGVTLLEG
HGKLLAGKQVEVTAQDGTTQIVEAGNVIIASGSKPIDIPPAPVDQDVIVDSTGALDFQSV
PKSLGVIGAGVIGLELGSVWSRLGSEVTVIEAQDKFLPAADEQIAKEAMKTLTKQGLKIR
LGARLTGSEVKKKQVTVTFTDADGEQQMTFDKLIVAVGRRPVTTDLLAADSGVDMDERGF
IFVNDQCETSVPGVYAIGDVVRGAMLAHKASEEGVMVAERIAGHKAQMNYDLIPSVIYTH
PEIAWVGKTEQQLKGEGVAVNVGTFPFAASGRAMAANDTGGMVKVIADAKTDRVLGVHVI
GPSAAELVQQGAIGMEFGTSAEDLGMMVFSHPTLSEALHEAALAVNGGAIHIANRKKR
NT seq 1437 nt   +upstreamnt  +downstreamnt
atgtctcagaaattcgacgtggtagtcatcggtgccggccctggcggttacgtagcagcc
atcaaggccgctcaactgggtttgaagactgcttgtattgaaaaataccaagacaaagac
ggcaagatcgccttgggcggtacttgcctgaacgtcggttgcattccgtctaaagcactg
ctcgacagctcgtggaagtaccacgaagcgcaggaaggttttgctgttcacggtatcact
gccaaaggcgtgagcatggacgtgccggcgatggttggccgcaagaacaccatcgtcaag
aacctgactggcggtgttgccactctgttcaaggctaacggcgtaaccctgcttgaaggc
cacggcaaactgctggctggcaagcaagtagaagtgactgcacaagacggcaccacgcag
atcgttgaagccggtaacgtgatcatcgcgtcgggctccaagccaatcgacattccacca
gcgcctgttgatcaggacgttatcgtcgactcgaccggcgccctggacttccagagcgta
ccgaagagcctgggcgttatcggtgctggcgtaatcggtctggagctgggttctgtctgg
tcgcgtctgggttcggaagtgactgttatcgaagcacaggacaagttcctgcctgctgct
gatgagcagatcgccaaagaagccatgaagaccctgaccaagcaaggcctgaaaattcgt
ctgggcgcacgcctgaccggttcggaagtgaagaagaagcaggtcactgtgaccttcact
gacgctgacggcgagcagcagatgactttcgacaagctgatcgtagcggtcggccgtcgt
ccggttaccaccgatctgctggctgcagacagcggcgttgacatggatgagcgtggcttc
atcttcgttaacgatcagtgcgaaaccagcgttccgggcgtttacgccatcggtgacgtg
gttcgcggcgcgatgctggctcacaaagcatcggaagagggcgtaatggttgccgagcgt
attgccggccacaaagctcagatgaactacgacctgattccttcggttatttacactcac
ccggaaatcgcatgggtcggcaagaccgagcagcagctgaaaggtgagggcgttgctgtc
aacgtcggtaccttcccgttcgcggccagcggccgtgcaatggctgccaacgacaccggc
ggtatggttaaagtgattgctgatgccaagactgaccgcgttctcggcgttcacgttatt
ggcccaagcgctgctgaactggttcagcagggtgcaattggcatggaattcggcaccagt
gctgaagatttgggcatgatggtgttctcgcacccaacattgtccgaagcgctgcatgaa
gcggcgttggctgtaaatggcggcgccattcacattgccaaccgcaaaaagcgctaa

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