Pseudomonas marincola: PMYSY11_2463
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Entry
PMYSY11_2463 CDS
T07318
Symbol
lpd
Name
(GenBank) lipoamide dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
pmao
Pseudomonas marincola
Pathway
pmao00010
Glycolysis / Gluconeogenesis
pmao00020
Citrate cycle (TCA cycle)
pmao00260
Glycine, serine and threonine metabolism
pmao00280
Valine, leucine and isoleucine degradation
pmao00310
Lysine degradation
pmao00380
Tryptophan metabolism
pmao00620
Pyruvate metabolism
pmao00630
Glyoxylate and dicarboxylate metabolism
pmao00640
Propanoate metabolism
pmao00670
One carbon pool by folate
pmao00785
Lipoic acid metabolism
pmao01100
Metabolic pathways
pmao01110
Biosynthesis of secondary metabolites
pmao01120
Microbial metabolism in diverse environments
pmao01200
Carbon metabolism
pmao01210
2-Oxocarboxylic acid metabolism
pmao01240
Biosynthesis of cofactors
Module
pmao_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pmao_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
pmao_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
pmao_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
pmao_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
pmao00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
PMYSY11_2463 (lpd)
00020 Citrate cycle (TCA cycle)
PMYSY11_2463 (lpd)
00620 Pyruvate metabolism
PMYSY11_2463 (lpd)
00630 Glyoxylate and dicarboxylate metabolism
PMYSY11_2463 (lpd)
00640 Propanoate metabolism
PMYSY11_2463 (lpd)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
PMYSY11_2463 (lpd)
00280 Valine, leucine and isoleucine degradation
PMYSY11_2463 (lpd)
00310 Lysine degradation
PMYSY11_2463 (lpd)
00380 Tryptophan metabolism
PMYSY11_2463 (lpd)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
PMYSY11_2463 (lpd)
00670 One carbon pool by folate
PMYSY11_2463 (lpd)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pmao04147
]
PMYSY11_2463 (lpd)
Enzymes [BR:
pmao01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
PMYSY11_2463 (lpd)
Exosome [BR:
pmao04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
PMYSY11_2463 (lpd)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
Pyr_redox_3
FAD_binding_2
HI0933_like
FAD_oxidored
FAD_binding_3
GIDA
DAO
NAD_binding_8
3HCDH_N
AlaDh_PNT_C
Thi4
Lys_Orn_oxgnase
2-Hacid_dh_C
Lycopene_cycl
UDPG_MGDP_dh_N
XdhC_C
Motif
Other DBs
NCBI-ProteinID:
CAE6921080
LinkDB
All DBs
Position
PMYSY11:complement(2566525..2567961)
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AA seq
478 aa
AA seq
DB search
MSQKFDVVVIGAGPGGYVAAIKAAQLGLKTACIEKYQDKDGKIALGGTCLNVGCIPSKAL
LDSSWKYHEAQEGFAVHGITAKGVSMDVPAMVGRKNTIVKNLTGGVATLFKANGVTLLEG
HGKLLAGKQVEVTAQDGTTQIVEAGNVIIASGSKPIDIPPAPVDQDVIVDSTGALDFQSV
PKSLGVIGAGVIGLELGSVWSRLGSEVTVIEAQDKFLPAADEQIAKEAMKTLTKQGLKIR
LGARLTGSEVKKKQVTVTFTDADGEQQMTFDKLIVAVGRRPVTTDLLAADSGVDMDERGF
IFVNDQCETSVPGVYAIGDVVRGAMLAHKASEEGVMVAERIAGHKAQMNYDLIPSVIYTH
PEIAWVGKTEQQLKGEGVAVNVGTFPFAASGRAMAANDTGGMVKVIADAKTDRVLGVHVI
GPSAAELVQQGAIGMEFGTSAEDLGMMVFSHPTLSEALHEAALAVNGGAIHIANRKKR
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgtctcagaaattcgacgtggtagtcatcggtgccggccctggcggttacgtagcagcc
atcaaggccgctcaactgggtttgaagactgcttgtattgaaaaataccaagacaaagac
ggcaagatcgccttgggcggtacttgcctgaacgtcggttgcattccgtctaaagcactg
ctcgacagctcgtggaagtaccacgaagcgcaggaaggttttgctgttcacggtatcact
gccaaaggcgtgagcatggacgtgccggcgatggttggccgcaagaacaccatcgtcaag
aacctgactggcggtgttgccactctgttcaaggctaacggcgtaaccctgcttgaaggc
cacggcaaactgctggctggcaagcaagtagaagtgactgcacaagacggcaccacgcag
atcgttgaagccggtaacgtgatcatcgcgtcgggctccaagccaatcgacattccacca
gcgcctgttgatcaggacgttatcgtcgactcgaccggcgccctggacttccagagcgta
ccgaagagcctgggcgttatcggtgctggcgtaatcggtctggagctgggttctgtctgg
tcgcgtctgggttcggaagtgactgttatcgaagcacaggacaagttcctgcctgctgct
gatgagcagatcgccaaagaagccatgaagaccctgaccaagcaaggcctgaaaattcgt
ctgggcgcacgcctgaccggttcggaagtgaagaagaagcaggtcactgtgaccttcact
gacgctgacggcgagcagcagatgactttcgacaagctgatcgtagcggtcggccgtcgt
ccggttaccaccgatctgctggctgcagacagcggcgttgacatggatgagcgtggcttc
atcttcgttaacgatcagtgcgaaaccagcgttccgggcgtttacgccatcggtgacgtg
gttcgcggcgcgatgctggctcacaaagcatcggaagagggcgtaatggttgccgagcgt
attgccggccacaaagctcagatgaactacgacctgattccttcggttatttacactcac
ccggaaatcgcatgggtcggcaagaccgagcagcagctgaaaggtgagggcgttgctgtc
aacgtcggtaccttcccgttcgcggccagcggccgtgcaatggctgccaacgacaccggc
ggtatggttaaagtgattgctgatgccaagactgaccgcgttctcggcgttcacgttatt
ggcccaagcgctgctgaactggttcagcagggtgcaattggcatggaattcggcaccagt
gctgaagatttgggcatgatggtgttctcgcacccaacattgtccgaagcgctgcatgaa
gcggcgttggctgtaaatggcggcgccattcacattgccaaccgcaaaaagcgctaa
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