Pseudomonas marincola: PMYSY11_3043
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Entry
PMYSY11_3043 CDS
T07318
Symbol
rimO
Name
(GenBank) ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
pmao
Pseudomonas marincola
Brite
KEGG Orthology (KO) [BR:
pmao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pmao03009
]
PMYSY11_3043 (rimO)
Enzymes [BR:
pmao01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
PMYSY11_3043 (rimO)
Ribosome biogenesis [BR:
pmao03009
]
Prokaryotic type
ribosomal protein modification factors
PMYSY11_3043 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
YajR_YAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
CAE6930672
LinkDB
All DBs
Position
PMYSY11:3170262..3171581
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AA seq
439 aa
AA seq
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MSTTAPKVGFVSLGCPKALVDSERILTQLRMEGYEVVPTYEDADVVVVNTCGFIDSAKAE
SLEVIGEAIAENGKVIVTGCMGVEEGSIRDVHPSVLSVTGPQQYEQVVNAVHEVVPPRQD
HNPLIDLVPPQGIKLTPRHYAYLKISEGCNHTCSFCIIPSMRGRLVSRPVGEVLSEAERL
VKAGVKELLVISQDTSAYGVDVKYKTDFWNGQPVKTRMTEMCEALSSMGVWVRLHYVYPY
PHVDELIPLMAAGKILPYLDIPFQHASPKVLKAMKRPAFEDKTLARIKKWREICPELTIR
STFIVGFPGETEEDFQYLLDWLTEAQLDRVGCFQYSPVEGASANLLDNHVPADVMQDRWD
RFMAHQQAISAARLQLKVGKEMEVLIDEVDDQGAVARCYADAPEIDGSVFLNTTDVKPGD
KVRVVIVDADEYDMWGELV
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccaccgctcctaaagtcggattcgtttcactgggttgcccaaaggcactggtg
gactccgaacgtatcctgacccagttgcgcatggaaggttacgaagtcgtgccgacttac
gaagacgccgacgtcgtggtggtaaacacctgcggcttcatcgacagcgccaaggccgag
tcgcttgaagtgatcggcgaagccatcgccgaaaacggcaaagtaatcgtcaccggctgc
atgggcgtcgaagaaggctcgatccgtgacgtgcacccaagcgtgctgtctgtcacaggc
ccgcagcagtacgagcaagtcgttaatgccgtgcatgaagtcgtaccaccgcgccaggat
cacaatccgttaatcgacctggtgccgccacagggcatcaagctgacgccgcgccattac
gcctacctgaaaatatccgaaggctgtaaccacacgtgcagcttctgcatcattccatcc
atgcgcggcaggctggtcagccgcccggtgggtgaagtgctgagcgaggccgagcgcctg
gttaaagctggcgttaaagagctgctggtaatctcgcaagacaccagcgcctacggcgtt
gacgttaagtacaagaccgacttctggaacggccagccggtgaaaacccgcatgaccgag
atgtgcgaagcgctgtcgagcatgggcgtctgggtgcgcctgcattacgtgtacccgtac
ccgcacgtggacgagctgattccgctgatggccgccggtaagatcctgccgtacctggat
atcccgttccagcacgccagcccgaaagtgctcaaagccatgaagcgtccggcgtttgaa
gacaagacgctggcgcgcatcaagaaatggcgtgaaatctgccctgagctgactattcgt
tcgaccttcatcgtcggcttcccgggcgaaaccgaagaggacttccagtacctgctcgac
tggctgaccgaagctcagctggatcgcgtcggctgcttccagtactcgccggttgaaggc
gcttccgccaacctgctcgacaaccacgtacctgccgacgtcatgcaggatcgctgggac
cgcttcatggcgcatcagcaagcgatcagcgcggcgcgcctgcagctgaaagttggcaag
gaaatggaagtgttgatcgacgaggttgatgatcagggcgccgtagctcgctgctacgcc
gatgccccggaaatcgacggcagcgtattcctcaacaccacagacgtgaagcccggcgac
aaagtccgcgtagtcatcgtcgacgccgacgaatacgacatgtggggcgagctggtctga
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