KEGG   Pseudomonas marincola: PMYSY11_3106
Entry
PMYSY11_3106      CDS       T07318                                 
Symbol
vgrG4b
Name
(GenBank) Type VI secretion system spike protein VgrG4b
  KO
K11904  type VI secretion system secreted protein VgrG
Organism
pmao  Pseudomonas marincola
Pathway
pmao03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:pmao00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    PMYSY11_3106 (vgrG4b)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pmao02044]
    PMYSY11_3106 (vgrG4b)
Secretion system [BR:pmao02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   PMYSY11_3106 (vgrG4b)
SSDB
Motif
Pfam: Phage_GPD Gp5_trimer_C Phage_base_V DUF2345 DUF6484
Other DBs
NCBI-ProteinID: CAE6931651
LinkDB
Position
PMYSY11:complement(3234383..3236431)
AA seq 682 aa
MFAPANQASFTLAIEGLDHDFKVLGFTGREALNQPYSFDVELVSEQPSLELESLLHKPAF
LQMSPGGSGIHGLLYRVAQGDAGKRLTRYEITLRPHLAYLEHSVNQRIFQHLTVEQIIVQ
VLEAHGILSTAYQFQLGGTYPPREYCVQYDETDLHFIQRLCEEEGIHYHFQHSAQGHILA
FGDDQVGFPTLAPIAYQQDAGMVADNPVIKRFSLRQETRSSRVTRRDYDFEKPSLTLEGA
AQSQVLPDLEDYDYPGRFTKQARGNLLASRALERHRSDYAVAHGRSDQPSLLSGHFITLS
NHPNAQWNDLWLINEVRHEGKQPQVLEESVTSDTGDSPDDFDHGYRNTFTATPWAVIHRP
PLIHQKPRILGSQSAVVTGPEGEEIHCDEYGRVKVVFHWDRAGIVTDKSSCWLRVSSSWS
GAKYGGIVIPRIGMEVLVSFLEGDPDQPLISGCLYHKENSVPYPLPANKTVSTFKTLSSP
GGAGFNELRIEDKTGQEQIFIHAERNWDQAIEHNQKITVHNERHDTVTANSYSAFKAEEH
RTTHADRKVEVRANDHLTVANNQHVKIDNSQFVDAGQEIHLSSGQKIVLEAGSELTLKVG
GSFIKIDPSGLTLVSPDVYLNSGGSPGIGSGAAPLLPGLALPADTDVPGEVLIAAQKETM
LKKQSICAACEAAEQEATHGAS
NT seq 2049 nt   +upstreamnt  +downstreamnt
atgttcgcgccagccaatcaggcctcattcaccttggccatcgaagggctagatcacgac
ttcaaagtcctggggttcaccggccgcgaagcgctcaatcagccgtattctttcgatgtt
gagctggtcagtgagcagcctagtcttgagcttgagagcctgctgcacaagcctgcgttc
ctgcagatgtcacccggcggcagtggtattcacggcctgttgtaccgtgtggcgcagggc
gatgcgggtaaacggttaacccgttatgaaattaccctgcgcccacacctggcctatctc
gaacacagtgttaaccagcgcattttccaacacttaacggttgagcaaattatcgtacag
gtgctcgaggcccacggcatcttgagtacggcctaccagtttcagcttggtggaacatat
ccgccgcgtgaatattgcgtgcagtacgatgaaacagatctgcatttcatccagcgtttg
tgtgaagaggaggggattcactaccactttcagcacagcgcgcagggtcacattctggcc
tttggcgacgatcaagtcggtttccccacgctagcgcccatcgcctatcagcaagacgca
ggcatggttgcagacaacccggtgatcaagcgtttcagcttgcgtcaggaaactcgctcc
tcacgcgttacccgccgcgattatgactttgaaaagcccagcctcacgcttgaaggtgcc
gcgcaatcccaagtattacccgaccttgaggattacgattatcccggtcgctttactaag
caggcgcgcggcaacctgctggccagtcgtgcccttgagcgccaccgcagtgactatgca
gtagctcatgggcgcagtgatcagccgagtttgctcagtggccatttcatcacattgagc
aatcatcccaatgcccaatggaatgatttgtggctgattaatgaggtgcgccacgaaggc
aagcagccgcaagtactcgaagaatcggtcaccagcgacacgggcgatagcccagatgat
tttgaccacggctatcgcaataccttcacggctacgccgtgggcggtgattcatcggccg
ccgctaattcatcaaaagccgcgcattctcggcagccaaagtgccgtggttaccggcccc
gaaggggaagagattcactgcgacgaatacggccgggtcaaagtggtttttcattgggat
cgcgccggcatcgttactgataaaagcagttgctggctgcgcgtttcatccagttggtcg
ggggctaaatacggcggcattgtcattccgcgaatcggcatggaggtgttggttagtttc
ctggaaggcgatccggatcagccactgataagcggttgcctgtaccacaaggaaaacagc
gtgccctatccgctgcccgccaacaaaaccgtgagcactttcaaaacgcttagctcgccg
ggtggggctggctttaacgagttgcgcatcgaagacaaaaccggccaagagcagattttc
atacatgccgagcgcaactgggatcaagcgattgagcacaaccagaaaatcaccgtgcac
aacgagcgccacgacaccgtcaccgccaacagttacagcgcattcaaagccgaagaacac
cgcaccactcatgcggaccgcaaggttgaggtgcgcgccaatgaccacctgactgtcgcc
aataaccagcacgtaaaaatcgacaactcgcagttcgtcgatgccggccaagagatccac
ttgtccagcggccagaaaatagtgcttgaggccggcagcgagctaacgctcaaagttggc
ggcagcttcatcaagatagaccccagcggcctcacgctggtcagtcccgatgtgtatctc
aatagcggcggtagtcctggtattggctccggcgctgcaccgctattgccggggctggct
ttaccggcggataccgatgtgcctggcgaagtactaattgcagcacagaaagaaacaatg
ctgaaaaagcaatcgatttgcgcagcctgcgaagcggctgagcaggaggcaacccatggc
gcgagttga

DBGET integrated database retrieval system