Pseudomonas marincola: PMYSY11_3337
Help
Entry
PMYSY11_3337 CDS
T07318
Symbol
ydcT
Name
(GenBank) putative ABC transporter ATP-binding protein YdcT
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
pmao
Pseudomonas marincola
Pathway
pmao02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pmao00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PMYSY11_3337 (ydcT)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pmao02000
]
PMYSY11_3337 (ydcT)
Transporters [BR:
pmao02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
PMYSY11_3337 (ydcT)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
TOBE_2
AAA_21
SMC_N
AAA_22
AAA_16
AAA
nSTAND_NTPase5
AAA_17
AAA_29
Motif
Other DBs
NCBI-ProteinID:
CAE6935652
LinkDB
All DBs
Position
PMYSY11:3473873..3474913
Genome browser
AA seq
346 aa
AA seq
DB search
MTLAVQFTDVSRVFGDVRAVDRVSIDIQDGEFFSMLGPSGSGKTTCLRLIAGFEHPSAGS
IRIHGVEAVGLAPYQRDVNTVFQDYALFPHMNVRDNVAYGLKVKGVGRSERLNRAEEALG
MVALAGYGDRKPAQLSGGQRQRVALARALVNRPRVLLLDEPLGALDLKLREQMQGELKKL
QRQLGITFIFVTHDQTEALSMSDRVAVFNKGRIEQVDTPRNLYMKPATPFVAEFVGTSNV
LRGEIAQRLTGSAQPFSIRPEHIQFAEGAASSEHVELSGVLHDIQYQGAATRFELKLDNG
ENLSISQANSQWGTQAQALTLGQQVTARWPREAMVTLHDNAATEAR
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgacccttgcagtgcaattcaccgatgtgtcccgcgtattcggcgacgtaagagccgta
gaccgggtgtccatcgacatccaggacggagaattcttttccatgctgggcccttccggc
tctggcaaaaccacctgtttgcgcctgatcgccggatttgaacacccgagcgccggctca
attcgaattcacggggtcgaggccgttggtctcgcgccgtaccagcgtgacgttaatacc
gtgttccaggactacgccctgttcccgcacatgaacgtgcgcgacaacgtggcctacggt
ttgaaggttaagggcgtgggcaggtccgaacgcctcaaccgtgccgaagaggcactgggc
atggtcgccctcgccggttatggcgatcgtaaaccggcgcagctttcgggtggccagcgc
cagcgtgtggcattggcccgcgcgctggtcaaccgcccgcgcgtgctgctcctcgatgag
ccactcggcgcactcgatttgaagctgcgtgaacaaatgcagggcgaactgaagaagctt
cagcgccaactgggtattaccttcatcttcgtcacccacgaccagaccgaagccctgtcg
atgtcggaccgagtggcggtgttcaacaaaggccggatcgagcaggtcgacaccccgcgc
aatctttacatgaagccggccacaccgtttgtggccgagttcgtcggcacctcgaatgtg
ctgcgcggtgaaatcgcccagcgcctgactggcagcgcgcagccgttctcgattcgcccg
gaacatattcaatttgccgaaggcgccgcctccagcgagcacgtcgaactcagcggcgta
ctccacgatattcagtatcagggcgcggccacgcgattcgaactgaagctcgataacggc
gagaacctcagcatcagccaggccaactcgcagtggggaactcaggcacaggcgcttaca
ctgggccagcaagtgactgcgcgctggccacgggaagcgatggtcacgctgcatgacaac
gccgcaacagaggctcgttga
DBGET
integrated database retrieval system
