Pseudomonas marincola: PMYSY11_3393
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Entry
PMYSY11_3393 CDS
T07318
Name
(GenBank) Type VI secretion system-associated protein
KO
K11893
type VI secretion system protein ImpJ
Organism
pmao
Pseudomonas marincola
Pathway
pmao02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pmao00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
PMYSY11_3393
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pmao02044
]
PMYSY11_3393
Secretion system [BR:
pmao02044
]
Type VI secretion system
Imp/Vas secretion system core components
PMYSY11_3393
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T6SS_VasE
Motif
Other DBs
NCBI-ProteinID:
CAE6936649
LinkDB
All DBs
Position
PMYSY11:complement(3539215..3540546)
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AA seq
443 aa
AA seq
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MNDHKVIWREGMLLRPQHFQHNDRYYDNQMKMRTQLLGSYSWGFLSIEIDVQFLNMGKIV
ISKAAGVLPDGSLFDLGGNSEPLTLEVPPNTGVCDVYLALPLVTGNHVESRTAAQTDVFA
RYIAYELDVVDSNAGDDVSSQVSCARPDFRLLLGEAQSEQSSVKLKICEILNSGPDGIVS
LNADFIPTFIHAHGSSYLLSCLKEVISMLAHRGDTIAERIRSNGKVGGAEVGDFMMLQLI
NRTELLLRHYLSIKQITPEELYRVLLVMLGDLSTFSSESKRPRLDNSYLHTDQGACFRKL
METIRQVLSMVLEQHALELVLQARQYGVLVSQLNDRSLLETGSFVLAASANCDSEELRHR
LPAHLKVGSVESIRQLVNLHLPGIKVTPLPVAPRQIPFHSKKTYFILDLTPEDLDQLERS
GGFAFHVSGEFDELEMKFWAIRN
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgaatgatcacaaagtaatctggcgtgaaggcatgcttttgaggcctcagcactttcag
cacaacgatcgttactacgataaccagatgaagatgcgcacccaactgctgggtagctat
tcatggggttttctgagcatcgagatagatgtgcaatttctcaatatgggcaaaattgtc
atcagtaaggccgctggcgtattaccagacggcagcctgtttgatttgggtggaaatagc
gaaccactaacgcttgaagtcccaccgaacaccggggtttgcgatgtttatctggcgctg
cctttggtgactggcaatcatgtcgagtcacgaaccgcggcgcagactgatgtatttgcg
cgttatattgcctatgagctggatgtggttgattccaacgctggggatgacgtcagttcc
caggtgagttgcgcccgtcctgattttcgtttgctgctcggcgaggcgcagagcgagcaa
agcagcgtaaaacttaaaatctgtgaaatcctcaattccggacctgatggcatcgtcagc
ctgaatgcggattttattccgaccttcatccatgcccacgggtcgagctatctgctgtct
tgcctgaaagaagtgatcagcatgctggcgcatcggggtgataccattgccgagcgaatt
cgctccaacggcaaggtgggtggcgcagaggtcggcgacttcatgatgctgcaactgatc
aaccgtaccgagttgcttctgcgccactacctcagcatcaagcaaattaccccggaagag
ctttatcgcgtattgctggtaatgctcggtgatctctcgacgttttccagcgaaagcaag
cggcccaggctggacaacagctacctgcataccgatcagggcgcctgtttccgcaaactg
atggaaaccatacgccaagtgctgtcgatggtacttgagcagcatgcgctggagctggtg
ctgcaagcgcgtcagtacggggtattggtctcgcaactgaatgatcgctcactgctcgag
accggctcatttgtgctggcggcgagtgccaactgcgactctgaagagttgcgccatcgg
ttaccggcgcacctcaaggtgggctcggtcgagagcattcggcagctggtaaacctgcac
ctcccaggcatcaaagtgacgccgcttcccgtcgcgccacgacagattccgttccactca
aaaaagacctacttcattcttgatctgaccccggaagacctggaccagttagagcgctca
ggcggctttgctttccatgtcagtggtgagtttgacgagttggaaatgaagttttgggcc
ataaggaattaa
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