Pseudomonas marincola: PMYSY11_3537
Help
Entry
PMYSY11_3537 CDS
T07318
Symbol
mrdA
Name
(GenBank) peptidoglycan DD-transpeptidase MrdA
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
pmao
Pseudomonas marincola
Pathway
pmao00550
Peptidoglycan biosynthesis
pmao01100
Metabolic pathways
pmao01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
pmao00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
PMYSY11_3537 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
PMYSY11_3537 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pmao01011
]
PMYSY11_3537 (mrdA)
Enzymes [BR:
pmao01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
PMYSY11_3537 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
pmao01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
PMYSY11_3537 (mrdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
PBP_dimer_2
LPD38
Motif
Other DBs
NCBI-ProteinID:
CAE6939003
LinkDB
All DBs
Position
PMYSY11:complement(3711045..3712949)
Genome browser
AA seq
634 aa
AA seq
DB search
MPQPIRLKDHEKDARLIRRRAMVGGAVIVALIMVLISRLYYLQVVQYEYHSTLSENNRVH
VQPIPPNRGLIYDRNGVLIADNRPSFSLTLTRERAGDWEHVLDVIVDVLGLTADDRELFE
KRVRQGRRPFEPVPVLFELNEEQIARLAINQFQLPGVDVSAQLVRHYPQGEHFAHSVGYV
GRINETELKKLDPVQYSGTHHIGKTGIERYYEDQLHGEVGYEEVETNARGRVLRVLNHTD
PKPGEDIVLTLDIKLQAAAEKALGGRRGAIVAIQPKTGEVLAMVSQPSFDPNPFVTGISF
KAYAELRDSIDRPLFNRVLRGLYPPGSTIKPMMAIAGLDAGVVTPNSRVFDPGFYQLPNN
THKYRNWNRYGDGWVDMDTALMRSNDTYFYDLAHKLGIDRMHDYMTKFGLGQRVSLDMFE
ETAGLMPSRDWKRSRYRQAWYPGETLILGIGQGYMQTTPLQLAQAVSLVASKGKWIRPHL
AKTVGDVPPVDENPVEDIVLRDPKYWDYARHGMEEVVNGARGTARKIGAASVYRIAGKSG
TAQVVAIKQGEKYDRSKVRERHRDHALFVGFAPASDPEIAVAVMVENGESGSGVAAPVMK
EVMDAWLLDENGQLKAEYAPQVAAPAVEAQTKNE
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atgcctcaaccgattcgcctaaaggaccatgaaaaagacgcacgcctgattcgtcggcgc
gcgatggtcggtggagcagtgattgtggcgctgatcatggtgctcatcagccgcctctat
tacttgcaagtggtgcagtacgagtaccactcgacgctgtctgaaaacaaccgtgtgcat
gttcagccgatcccgcctaaccgcggcctgatctatgaccgcaacggcgttctgatcgcc
gataaccgtcccagtttcagcctgaccctgacacgtgagcgtgccggggattgggagcat
gtgctcgacgtaatcgtcgacgtgctggggctgacggccgatgaccgcgagctgttcgag
aagcgcgtgcgtcaggggcggcgtccgtttgagccggtgccggtgttgtttgagctgaac
gaagagcagatcgcacggcttgcgattaaccagttccagttaccgggcgtggatgtatcg
gctcagttggtgcgccattatccgcaaggcgagcacttcgctcactcggtggggtatgtc
ggccggattaacgaaacagaactgaaaaagctcgatccggtgcagtacagcggtactcac
cacatcggtaaaaccggtatcgaacgttactatgaagatcagttgcacggtgaggtcggc
tacgaagaagtcgaaaccaacgcgcggggccgcgttttgcgggtgctcaaccataccgac
ccaaaaccgggcgaagacattgttctgaccctcgatatcaagctccaggccgcggcggaa
aaggccctcggagggcgtcgtggcgcgattgtggcgattcagccgaagaccggcgaggtg
ctggcgatggtcagtcagccgagtttcgatccgaatccgttcgtgaccgggatcagcttc
aaggcttacgcagaactgcgcgactcgattgaccggccgctgttcaaccgggtgctgcgc
gggctgtatccgccaggctcgacaatcaagccgatgatggccattgccggtctcgatgca
ggcgtggtgacgccgaactcacgggttttcgatccgggtttctatcagttgccgaataac
acccacaaataccgtaactggaaccgttacggcgacggctgggtggacatggatactgcg
ctgatgcgctccaatgacacgtatttttacgatttggcgcacaagctgggcatcgatcgc
atgcatgattacatgaccaaatttggtctgggtcagcgtgtctcactggatatgttcgaa
gaaacggcaggcttgatgccttcgcgagactggaagcgctcgcgctatcgccaagcctgg
tatccgggcgaaaccctgattctgggtatcggtcagggctacatgcaaacaacgcctttg
cagttggcgcaggccgtgtcgctggtggcgagcaagggcaagtggattcgtccacacctg
gcaaaaactgtcggcgacgtaccgcctgtggatgaaaatccagtcgaagacattgtgctg
cgcgaccccaaatattgggattacgcgcgtcatggcatggaagaagtcgtcaacggcgca
cgcggcacggcacgtaaaatcggtgctgcctcggtgtaccggatcgccggtaagagcggt
acggcgcaggttgtagcgatcaaacagggtgagaaatacgaccgcagcaaggtgcgagag
cgtcaccgtgaccacgccttgttcgtcggttttgcgccggcaagtgacccggaaatcgcc
gtggctgtaatggttgagaacggtgaatctggctcgggtgttgccgcgccggtcatgaaa
gaggtgatggacgcctggctgctggatgaaaacggccagctcaaggcggaatatgcgccg
caagttgcagctcccgcggtagaggcgcagaccaaaaatgagtaa
DBGET
integrated database retrieval system
