Pseudomonas marincola: PMYSY11_3569
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Entry
PMYSY11_3569 CDS
T07318
Name
(GenBank) Diaminopimelate decarboxylase
KO
K23385
D-ornithine/D-lysine decarboxylase [EC:
4.1.1.116
]
Organism
pmao
Pseudomonas marincola
Pathway
pmao00310
Lysine degradation
pmao00470
D-Amino acid metabolism
pmao01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pmao00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
PMYSY11_3569
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
PMYSY11_3569
Enzymes [BR:
pmao01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.116 D-ornithine/D-lysine decarboxylase
PMYSY11_3569
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-ProteinID:
CAE6939512
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All DBs
Position
PMYSY11:complement(3740570..3742021)
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AA seq
483 aa
AA seq
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MSQVVALHPWKRAEHLTSENNKLLIDGVQAESLIAQYGSPLYVYSETRLRENALDILCNF
RREHANTRVCFASKACANLAVLKVFKDCGLAVEVNSGGEFYKACVAGYKPADMVFNGVAK
QRGELREVIAAGIGAINVDSLSEVQRILEVATELKQQARLTLRIIPEIQGGAAAGWQTGT
SSSKFGMTSLEQAAAIELIVQHPDALKMVGVHAHIGTQVNDIAIYEAEAQFLIDYVRHVC
EMLPYPLEHVNLGGGFPKNYSSAQENFSRVAAHYGENYRTSIDFAQLSRHLIKPIAAALG
EQIEIIVEPGRSMVSDTAILLSRIEARKQRQNNPVYYLDAGYSVLFDIYHGWYFHMVNAS
RADDVQTKNCRMAGPLCDSSDTYYDIEGEGAVSSLLAAEPALNAHRSVLEKVLVNQPNLR
ELPADTGMGDIIALLDVGAYALENMTEYCGRQAAAAVMVDLQQGSRLIRRRAQYEDLLNY
DVD
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgagccaagttgttgcgctacacccatggaagagagccgagcacctgaccagtgagaac
aataaattactgattgatggggttcaggccgagtcgttgattgctcaatacggctcgccg
ctttacgtatattcggaaacccgcctgcgcgaaaacgcgctggatatcctctgcaatttc
cgccgcgagcacgccaacacccgtgtgtgttttgccagtaaggcgtgcgccaatctggcc
gtgctcaaagtcttcaaggattgcgggttggcggtcgaggtcaactccggcggtgagttc
tacaaagcctgcgttgccggatacaaacctgccgacatggtgttcaacggggtggccaag
cagcgcggtgaactacgcgaggtgatcgcggccggcattggcgctatcaatgtcgactcg
ctgagcgaggtccagcgcattcttgaggtggccaccgagttgaagcagcaggctcgcctg
accttgcgcattattcccgagattcagggcggcgcagccgcgggctggcaaaccggtaca
tcaagctccaaattcggcatgaccagccttgagcaagctgctgcgatcgagctgattgtg
cagcacccggatgccttgaaaatggtcggagtgcacgcgcacattggtactcaggtaaac
gacatagcgatttacgaggctgaggcacagttcttaatcgactacgtccgccacgtttgc
gagatgctgccgtacccgctggagcatgtgaacctcggcggtggctttccgaaaaactac
agcagtgcgcaagagaactttagccgggtggccgcgcactacggcgagaactatcgcacc
agtatcgacttcgcccaactctccaggcatctgatcaaaccgattgctgcagcgctgggc
gagcaaatagaaatcatcgtcgagcccgggcgcagcatggtcagcgatacggccattttg
ctcagtcgcatcgaagccagaaagcaacgccagaacaatccggtgtattacctcgatgcc
ggttacagcgtgctgttcgatatctatcacggctggtatttccacatggtcaacgcctcg
cgcgcggacgatgtgcaaaccaagaactgccgcatggccggcccgctgtgtgacagcagt
gacacttactacgacatcgaaggcgagggcgcagtcagttccttgctggcggctgagcct
gcattgaatgcgcatcgcagcgtgctggaaaaggttctggtcaatcagcccaacttgcgc
gagttaccggcagataccggcatgggcgacataatcgccttgctggatgtgggcgcttat
gcgctggaaaacatgaccgagtactgtggccgccaggctgccgcagcggtgatggtcgac
ttgcaacaaggcagccggctaatccgccgccgtgcgcaatatgaagacctgctcaactac
gacgttgactga
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