Pseudomonas marincola: PMYSY11_3906
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Entry
PMYSY11_3906 CDS
T07318
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
pmao
Pseudomonas marincola
Pathway
pmao00260
Glycine, serine and threonine metabolism
pmao00460
Cyanoamino acid metabolism
pmao00630
Glyoxylate and dicarboxylate metabolism
pmao00670
One carbon pool by folate
pmao00680
Methane metabolism
pmao01100
Metabolic pathways
pmao01110
Biosynthesis of secondary metabolites
pmao01120
Microbial metabolism in diverse environments
pmao01200
Carbon metabolism
pmao01230
Biosynthesis of amino acids
pmao01240
Biosynthesis of cofactors
pmao04981
Folate transport and metabolism
Module
pmao_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
pmao00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
PMYSY11_3906 (glyA)
09102 Energy metabolism
00680 Methane metabolism
PMYSY11_3906 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
PMYSY11_3906 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
PMYSY11_3906 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
PMYSY11_3906 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
PMYSY11_3906 (glyA)
Enzymes [BR:
pmao01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
PMYSY11_3906 (glyA)
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Gene cluster
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Motif
Pfam:
SHMT
Aminotran_1_2
Cys_Met_Meta_PP
Beta_elim_lyase
DegT_DnrJ_EryC1
Phage_capsid
OKR_DC_1
Motif
Other DBs
NCBI-ProteinID:
CAE6945327
LinkDB
All DBs
Position
PMYSY11:complement(4121610..4122863)
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AA seq
417 aa
AA seq
DB search
MFSKNDQIQGYDDELLSAMNQEEQRQEHHIELIASENYTSKRVMEAQGSGLTNKYAEGYP
GKRYYGGCEHVDKVEQLAIDRAKQLFGADYANVQPHSGSSANSAVYLALLQAGDTILGMS
LAHGGHLTHGAKVSSSGKLYNAVQYGIDTSTGLIDYDEVERLALEHKPKMIVAGFSAYSK
TLDFPRFRAIADKVGAYLFVDMAHVAGLVAAGLYPNPLPYADVVTTTTHKTLRGPRGGLI
LAKANEEIEKKLNSAVFPGAQGGPLMHVIAGKAVCFKEALEPGFVEYQQQVIKNAQAMAK
VFIDNGFDVVSGGTDNHLFLLSLIKQGITGKDADAALGRAGITVNKNAVPNDPQSPFVTS
GLRIGTPAVTTRGFKEPQCIELAGWICELLQNLGDADVEAQIAGLAAGLCADYPVYR
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttcagcaaaaatgaccagatacagggttacgacgacgagttgctcagtgcaatgaat
caagaagagcagcgtcaggagcatcatatcgagctgatcgcctcggagaactacaccagc
aagcgggtgatggaagctcaaggcagcgggcttactaacaagtacgcggaaggctatccg
ggcaagcgctattacggcggttgtgagcacgtcgacaaggttgaacaattggcgattgat
cgcgccaagcagctgttcggcgccgactacgccaacgtgcagccacactcgggctcgtct
gccaactcggcggtgtatctggcgctgctgcaagcgggcgacaccattttgggcatgagc
ctggcgcacggtggtcacctgactcacggcgccaaagttagctcatccggcaagctgtac
aacgcggtgcaatacggcattgataccagcaccggcctgattgattacgacgaagtagag
cggctggcgctggagcacaagccaaagatgattgtggcgggcttctcggcttactcgaaa
accctcgacttcccgcgtttccgcgcaattgccgacaaggttggtgcttacctgtttgtc
gacatggcgcacgtggcgggtctggtggcggcggggctgtacccgaatccgcttccatac
gccgatgtggtcaccaccacgacgcataaaaccctgcgcggtcctcgcggcggtttgatt
ctggccaaggccaacgaagagattgagaaaaagctcaactcggcagtcttccccggcgct
cagggcgggccgttgatgcacgtgattgccggtaaggcggtgtgctttaaagaggcgctg
gagccgggctttgttgagtatcagcagcaggtgatcaaaaacgctcaggcgatggccaag
gtgtttattgataacggttttgatgtggtgtccggcggcaccgacaaccacctgtttttg
ctcagcctgatcaagcaaggcattaccggcaaagatgctgatgcggcgctgggccgtgcg
ggtatcacggttaacaagaatgcggtgccgaacgatccgcaatcgccgtttgtgacctct
ggcctgcgcattggtacgccagcggtgaccacgcgcggcttcaaagaacctcagtgcatt
gagttggcgggctggatttgtgagttgttacagaacctcggcgatgccgatgttgaagcg
caaatcgcgggactggctgctgggctgtgcgcggattaccccgtttaccgctga
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