Pseudomonas marincola: PMYSY11_3956
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Entry
PMYSY11_3956 CDS
T07318
Name
(GenBank) Protocatechuate 3,4-dioxygenase beta chain
KO
K00449
protocatechuate 3,4-dioxygenase, beta subunit [EC:
1.13.11.3
]
Organism
pmao
Pseudomonas marincola
Pathway
pmao00362
Benzoate degradation
pmao00624
Polycyclic aromatic hydrocarbon degradation
pmao01100
Metabolic pathways
pmao01120
Microbial metabolism in diverse environments
pmao01220
Degradation of aromatic compounds
Brite
KEGG Orthology (KO) [BR:
pmao00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
PMYSY11_3956
00624 Polycyclic aromatic hydrocarbon degradation
PMYSY11_3956
Enzymes [BR:
pmao01000
]
1. Oxidoreductases
1.13 Acting on single donors with incorporation of molecular oxygen (oxygenases)
1.13.11 With incorporation of two atoms of oxygen
1.13.11.3 protocatechuate 3,4-dioxygenase
PMYSY11_3956
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Gene cluster
GFIT
Motif
Pfam:
Dioxygenase_C
CarboxypepD_reg
DUF4198
Malic_M
DUF6795
CooC_C
Big_1
SpaA
BIg21
Ig_DR_A0283-like
Invasin_D3
SdrD_B
Motif
Other DBs
NCBI-ProteinID:
CAE6946173
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All DBs
Position
PMYSY11:complement(4180997..4181656)
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AA seq
219 aa
AA seq
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MLCLGRQRLWVTAIASSCLLLAPAAWAVSAPTPAQAAVAFYPVQLPEDRDNDLTQVRMHT
QAASGVVVELFGQIVDAQGEPVAGAQVEIWQADAGGHYFNEHHGRDENFQGYGQATTDSN
GQYSFVTVRPGAVGTRAPHINIAVSVAGKPRFVTQCYIRGERHNARDPQLNALSNPARRE
QLIVPFVPVAGAKVEKQVARFDIVLGLNAPPTALAAHLS
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
atgctgtgcctcggtcgccagcgcttatgggttactgccatcgccagcagctgcttgctg
ctggcgcctgccgcttgggcggtcagcgcgccaacgcccgcgcaggcagccgtggcgttc
tatccggtgcagttacccgaagaccgcgacaatgatctcacccaggtgcgcatgcacacc
caagcggccagcggtgttgtggtcgagctattcgggcagattgtcgatgcgcaaggcgag
ccagttgcgggcgctcaggtcgaaatctggcaggccgatgccggcggccattacttcaat
gagcatcatggccgtgatgaaaattttcagggctacgggcaggccactaccgacagcaac
ggccaatacagttttgtcaccgtgcgccccggtgctgtcggcacgcgtgcgccgcacatt
aatatcgccgtgagtgtggccggcaagccacgtttcgtgacgcaatgctatatccgcggt
gaacggcacaatgcccgcgacccgcaactcaatgcactgagcaatcctgcccggcgtgaa
caattgatcgtgcctttcgtgccggttgcgggcgccaaagttgagaaacaagtcgccagg
ttcgatatcgtgcttggcctcaatgcgccgccaaccgcgctggctgcgcatctatcctag
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