Pseudomonas marincola: PMYSY11_4061
Help
Entry
PMYSY11_4061 CDS
T07318
Symbol
msbA
Name
(GenBank) Lipid A export ATP-binding/permease protein MsbA
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
pmao
Pseudomonas marincola
Pathway
pmao02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pmao00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
PMYSY11_4061 (msbA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pmao02000
]
PMYSY11_4061 (msbA)
Enzymes [BR:
pmao01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
PMYSY11_4061 (msbA)
Transporters [BR:
pmao02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
PMYSY11_4061 (msbA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
AAA_22
ABC_ATPase
RsgA_GTPase
AAA_29
nSTAND3
AAA_30
MMR_HSR1
WH_GTF3C1_N
NB-ARC
nSTAND1
APS_kinase
AAA_24
Motif
Other DBs
NCBI-ProteinID:
CAE6947933
LinkDB
All DBs
Position
PMYSY11:complement(4296457..4298253)
Genome browser
AA seq
598 aa
AA seq
DB search
MSDKTPVSTSLKIYFRLLSYVKPYVGYFGLSIVGYVIFASTQPMLAGILKYFVDGLSNPQ
AVLFPTVPYLQDLELLQAVPLLIVLIAAWQGLGSFLGNYYLAKVSLSLVHDLRTALFDSL
LNLPNRYFDSHNSGHLISRITFNVTMVTGAATDAIKVVIREGLTVVFLFIYLLWMNWQLT
MVMLAILPVIALMVGSASKKFRKQSKKIQVAMGDVTHVASETIQGYRVVRSFGGETYESE
RFETASRDNTFKQLKMTKTGAVYTPMLQLVIYVAMAVLMFLVLYLRGDATAGDLVAYITA
AGLLPKPIRQLSEVSATIQKGLAAADSIFEQLDESPEVDSGSVEVEKATGRLEVKGLSFQ
YPGTEKAVLHDINFVAEPGQMIALVGRSGSGKSTLANLIPRFYHHETGQILLDGVDIEEY
TLRNLRRHIALVTQQVTLFNDSVANNIAYGDLAGAPREDIERAVEAAYAKEFIDKLPEGL
DTEVGENGVLLSGGQRQRLAIARALLKDAPILVLDEATSALDTESERHIQAALDSVMKGR
TTLVIAHRLSTIEKADQILVMEQGQIVERGTHAELLAMNGYYARLHALGLDEPESENV
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atgagcgataaaacccctgtctctaccagtctaaaaatttatttccgcctgctcagctac
gtaaaaccttacgtcggctactttgggttgagtatcgtcggctacgtgatttttgcttcg
acgcagccgatgctcgctggaattctcaagtacttcgttgatggcttgtccaatccgcaa
gcggtgcttttcccgacagtcccttacctgcaagacctcgaactgctgcaggcggtgccg
ctgctaatcgtcttgattgcagcctggcagggtcttggctcgtttctgggtaactattat
ctggccaaggtgtcgttgagcctggtgcacgatttgcgcacggcgttattcgacagcttg
ttgaatctgcccaatcgttacttcgacagtcacaactcgggtcatctgatctcacgcatc
accttcaacgtgaccatggtcacaggggctgccactgatgcgatcaaggtggttatccgc
gaagggttgacggtggtcttcctgtttatctacctgttgtggatgaactggcagttgacc
atggtcatgctggcgatcctgccggttattgcgctgatggttggcagtgccagcaaaaaa
ttccgcaaacagagcaagaaaatccaggtggcgatgggggacgtgacacacgtggcctcg
gaaaccattcagggctatcgcgtagtgcgcagctttggcggcgagacttatgagtctgag
cgtttcgagactgcgagccgtgacaacaccttcaagcagttgaaaatgaccaagactggc
gcggtttacaccccgatgctgcagttggtcatctatgttgcgatggctgttctgatgttc
ctggtcttgtatcttcgcggcgatgcgactgccggtgatctggtggcttacatcacggct
gcgggtctgctgcccaagccgattcgccagttgtctgaggtgagcgccaccatccagaaa
ggcctggcagcggcggacagcatctttgagcagcttgatgagtcgccggaagtcgacagc
ggttcagtcgaggtcgaaaaggcaaccggtcgtctggaggtcaaaggcctcagcttccag
tatccaggtaccgagaaggccgtgcttcacgacattaattttgtcgcggaacccggccag
atgattgctctggtaggacgctccggcagcggcaagtcgacactggctaacctgattccg
cgcttctatcaccatgaaaccgggcagatcctgcttgatggcgtcgatatcgaagagtac
accctgcgtaacctgcgtcggcatatcgcgctggtgacccagcaggtgacgctgttcaac
gattccgttgccaacaacattgcctacggtgatcttgccggtgcgccgcgtgaagacatc
gagcgtgcggtagaggcagcgtatgccaaagagtttatcgataagctgccggaaggcctc
gacacagaagtgggcgagaacggcgtattgctctctggcggtcagcgccagcgtttggcg
attgcccgtgcgctgttgaaggacgcgccgattctggtgctcgacgaagcgacttcggcg
ctggataccgaatctgagcggcatattcaggccgcgctggattcagttatgaaaggccgg
acgacgctggtgatcgctcaccgtttgtcgactatcgagaaggccgatcagattctggtg
atggagcaggggcagattgtcgagcgcggcactcatgccgagctgctggcgatgaatggc
tattacgcccgcctgcatgcgctgggactggatgagcccgagtctgaaaacgtctga
DBGET
integrated database retrieval system
