Pseudomonas marincola: PMYSY11_4438
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Entry
PMYSY11_4438 CDS
T07318
Symbol
uvrD
Name
(GenBank) ssDNA translocase and dsDNA helicase - DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pmao
Pseudomonas marincola
Pathway
pmao03420
Nucleotide excision repair
pmao03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pmao00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PMYSY11_4438 (uvrD)
03430 Mismatch repair
PMYSY11_4438 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmao03400
]
PMYSY11_4438 (uvrD)
Enzymes [BR:
pmao01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PMYSY11_4438 (uvrD)
DNA repair and recombination proteins [BR:
pmao03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PMYSY11_4438 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
PMYSY11_4438 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
AAA_11
AAA_12
Viral_helicase1
AAA_22
Motif
Other DBs
NCBI-ProteinID:
CAE6954143
LinkDB
All DBs
Position
PMYSY11:4695121..4697316
Genome browser
AA seq
731 aa
AA seq
DB search
MHDDISFLLNSLNDAQRQAVAASLGRQLVLAGAGSGKTRVLVHRIAWLIQVEHASPHSIL
SVTFTNKAAAEMRARIEQMLGHSPAGMWVGTFHGLAHRLLRAHWQEAGLAENFQILDSDD
QQRMVKRVIRDLGLDEQRWPARQAQWFINAQKDEGLRPDNIQPAGDHYLATMLNIYKTYE
ETCARAGVIDFSELLLRALDLWRNKPGLLEHYQRRFRHVLVDEFQDTNAVQYAWLRILAK
GGDSLMVVGDDDQSIYGWRGAKIENIQQFSSDFADAEMIRLEQNYRSTAGILKAANALIA
NNQGRLGKELWTEDGDGEPISLYAAFNEHDEARYVVESIEDALRKDGLKRSEIAILYRSN
AQSRVLEEALLREKIPYRIYGGQRFFERAEIKNAMAYMRMLDGRGNDAALERVINVPARG
IGEKTVEQIREYARTHDVSMWHAITLMLEHKALPGRASGALAGFIELIENLAAKVAEMPL
HLMTQTVIEQSGLITYHKAEKGEKAQARVENLEELVSAARAFENHEEPEEDLTPLQAFLG
HASLEAGDTQAAENEDSVQLMTLHSAKGLEFPLVFLVGVEEGLFPHKMSLDEPGRLEEER
RLAYVGITRAMQKLIVSYAETRRLYGSETYNKVSRFIREIPPALVQEVRLSNSVSRPFTS
NNRNMGGTSMFAGSEVPQTPFSLGQRVQHSLFGEGTILNFEGAGAQARVQVNFESEGSKW
LMLSYAKLEAL
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgcatgatgacatctcgtttctcctcaactctctcaacgatgcccagcgtcaggccgta
gcggccagccttggccgtcagttggttctggccggcgcaggttccggcaaaactcgcgtg
ctggtgcaccgtatcgcctggcttattcaggtcgagcatgcctcgccgcacagcattttg
tcggtaacatttaccaacaaagcagctgcggaaatgcgcgcgcgtatcgaacaaatgctc
ggtcacagtccagccggcatgtgggtgggtacgttccacggattggcgcatcgcttattg
cgcgcgcactggcaggaagcaggactggcggaaaacttccagatcctcgactccgacgac
cagcagcgcatggtcaaacgggttatccgcgaccttggccttgatgagcaacgctggccc
gcacgtcaggcgcagtggtttatcaacgcccagaaagacgaaggcctgcgcccggacaat
attcagccggcgggtgatcactacctcgccaccatgctcaatatctacaagacctacgaa
gaaacctgcgcgcgggccggagtcatcgacttctccgaactgctgctacgcgcgctggat
ctgtggcgcaacaagcccggtttgcttgagcactaccagcgccgtttcaggcacgtactg
gtcgacgaattccaggacaccaacgccgtgcaatacgcctggctgcggattctcgccaaa
ggcggtgacagcttgatggtggtcggcgatgacgatcagtccatctacggctggcgcggc
gccaagatcgaaaatattcagcagttctccagcgacttcgccgacgccgagatgatccgt
ctggagcaaaactatcgctccacggctggcattctcaaggccgccaatgccctgatcgcc
aataatcagggacgcctcggcaaagagttgtggaccgaagatggcgacggcgaaccgatt
agcttgtacgccgctttcaacgagcacgacgaagcccgttacgtggttgagtcgatcgaa
gatgcgttgcgcaaggacggtctcaagcgcagtgaaatcgccattctgtatcgttccaac
gcccagtcgcgggtgcttgaagaagccctgctgcgcgagaaaatcccctatcgcatttat
ggcggccagcgcttcttcgagcgcgccgaaatcaagaatgcgatggcctacatgcgcatg
ctcgatggccgtggcaacgacgccgcattggagcgggtaatcaacgttccagcccgcggc
atcggcgagaaaactgtcgagcagatccgcgaatatgcgcgcacccacgacgtctcgatg
tggcacgcgatcaccctgatgcttgagcataaagctctgccgggccgtgcctcgggggcg
ctcgccggttttatcgagctgatagagaacctggccgccaaagtcgccgaaatgccgctg
cacctgatgacccagaccgttatcgagcaaagcggcctgatcacttatcacaaggctgaa
aaaggcgaaaaagctcaggcacgggtagaaaaccttgaggaactggtgagcgcagcgcgc
gctttcgagaatcacgaagaacccgaagaagacctgacaccgttgcaagcattcctcggc
catgcctcgcttgaagcaggtgatactcaagcagccgaaaacgaagacagcgtgcaactg
atgaccctgcacagcgccaaaggcctcgaattcccgctggtatttctggtgggcgtcgaa
gaaggtctgttcccgcacaagatgagcctcgatgagccgggccgccttgaagaagaacgc
cgtctggcctacgtgggcatcacccgggcgatgcagaagctgattgtcagctatgccgaa
acccgtcgcctgtacggcagtgaaacctataacaaagtctcgcgctttattcgtgaaata
ccgccggcactggttcaggaagtacgcctttccaacagtgtttcccggcctttcaccagc
aacaaccgcaacatgggcggcaccagcatgttcgctggctccgaggttccgcaaacccca
ttcagcctgggccagcgggtacaacactcattgttcggcgaaggcaccattctcaatttt
gagggtgccggggcgcaggcgcgggtacaggttaattttgaaagcgaaggaagcaagtgg
ctgatgctcagctacgccaagctagaagccttataa
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