Pseudomonas marincola: PMYSY11_4454
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Entry
PMYSY11_4454 CDS
T07318
Name
(GenBank) DNA polymerase III epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
pmao
Pseudomonas marincola
Pathway
pmao03030
DNA replication
pmao03430
Mismatch repair
pmao03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pmao00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PMYSY11_4454
03430 Mismatch repair
PMYSY11_4454
03440 Homologous recombination
PMYSY11_4454
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pmao03032
]
PMYSY11_4454
03400 DNA repair and recombination proteins [BR:
pmao03400
]
PMYSY11_4454
Enzymes [BR:
pmao01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PMYSY11_4454
DNA replication proteins [BR:
pmao03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PMYSY11_4454
DNA repair and recombination proteins [BR:
pmao03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PMYSY11_4454
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
CAE6954433
LinkDB
All DBs
Position
PMYSY11:4712080..4712817
Genome browser
AA seq
245 aa
AA seq
DB search
MSLFMPREREPQTVAPNWQAHLAALAETAKDSHLRGFYAAGVPAADTPIRDVPMIALDVE
TTGLQVGTHSIVSLGLMPFDLNRIHCGQSKYWVVKPMSELSSESVAFHHITHSDIDNAPR
LTHIFEELLDAMAGKIVVVHYRNIEREFLNHAVHVHLNEGLSFPVIDTMQLEAHLHGSQL
KQSLWSKLLRRQPLSIRLADSRLRYNLPHYQAHHALTDAMATAELLQAQIATHFSPDTPL
GDLWL
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgagcctgttcatgccgcgtgagcgcgagccgcaaacagttgcgccaaactggcaggcg
catcttgcagcgctggcggaaacggccaaggactcacatttgcgcgggttttatgccgcc
ggtgtacccgcagcagacacgccaatacgcgacgtgccgatgattgcgctggatgtcgaa
actaccggtttgcaggtcggcacacattcgattgtcagcctgggcctgatgcctttcgac
ctgaaccggattcattgcggccagagtaaatactgggtagtaaaaccgatgtctgaactc
agcagcgagtcggtggcgttccatcacattacccactccgacattgacaatgccccccgc
ctcacccatatcttcgaggagttactcgacgctatggccggcaaaattgtggtggtgcat
taccgcaacatcgagcgtgagtttcttaatcatgcggtgcatgtacacctcaatgaaggc
cttagttttccggttatcgacaccatgcaactggaggctcatttacatggcagccagttg
aagcagagcttgtggagcaaattgctgcgccgccaacctttgtcgattcgcctggccgac
agccgcctgcgttacaacctgccgcattatcaggcgcatcacgcgctgaccgatgcaatg
gcaacagcagagctgctgcaagcgcagatcgccacgcatttctcgcctgacacgccactc
ggcgatctctggctgtaa
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